C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nucleoporin 210kDa
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000132182 NUP210 9606 - 3:13316235-13420309 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000254508 NUP210-001 13316235-13420309 protein_coding
  ENST00000420141 NUP210-002 13351663-13420309 retained_intron
  ENST00000479519 NUP210-003 13351661-13354694 retained_intron
  ENST00000485755 NUP210-004 13336809-13341141 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000254508ENST00000420141
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000254508 0.145±0.00 3.947±0.00 0.729±0.42 0.508±0.07 0.231±0.00 0.334±0.00 0.951±0.68 1.382±1.09 2.282±0.00 0.946±0.00 1.543±0.99 3.283±0.80 2.151±0.16
ENST00000420141 N/A N/A 0.272±0.00 1.061±0.00 N/A 0.132±0.00 N/A N/A N/A 0.298±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00051B CIL_00051B_0001 CGP 3:12897220-13420309
CIL_000518 CIL_000518_0001 CGP 3:13316235-13506424

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0005509 IEA calcium ion binding
GO:0005635 TAS nuclear envelope
GO:0005643 IEA nuclear pore
GO:0005783 IEA endoplasmic reticulum
GO:0005975 TAS carbohydrate metabolic process
GO:0007077 TAS mitotic nuclear envelope disassembly
GO:0008645 TAS hexose transport
GO:0010827 TAS regulation of glucose transport
GO:0015031 IEA protein transport
GO:0015758 TAS glucose transport
GO:0016020 IDA:IEA membrane
GO:0016032 TAS viral process
GO:0019221 TAS cytokine-mediated signaling pathway
GO:0044281 TAS small molecule metabolic process
GO:0046983 IEA protein dimerization activity
GO:0051028 IEA mRNA transport
GO:0055085 TAS transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063333 nup210 nucleoporin 210 protein_coding Danio_rerio
ENSMUSG00000030091 Nup210 nucleoporin 210 protein_coding Mus_musculus

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