C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nucleoporin 210kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000254508 NUP210-001 ENSG00000132182 9606 - 3:13316235-13420309 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000254508
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000254508 0.145±0.00 3.947±0.00 0.729±0.42 0.508±0.07 0.231±0.00 0.334±0.00 0.951±0.68 1.382±1.09 2.282±0.00 0.946±0.00 1.543±0.99 3.283±0.80 2.151±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00051B CIL_00051B_0001 CGP 3:12897220-13420309
CIL_000518 CIL_000518_0001 CGP 3:13316235-13506424

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0005509 IEA calcium ion binding
GO:0005635 TAS nuclear envelope
GO:0005643 IEA nuclear pore
GO:0005783 IEA endoplasmic reticulum
GO:0005975 TAS carbohydrate metabolic process
GO:0007077 TAS mitotic nuclear envelope disassembly
GO:0008645 TAS hexose transport
GO:0010827 TAS regulation of glucose transport
GO:0015031 IEA protein transport
GO:0015758 TAS glucose transport
GO:0016020 IDA:IEA membrane
GO:0016032 TAS viral process
GO:0019221 TAS cytokine-mediated signaling pathway
GO:0044281 TAS small molecule metabolic process
GO:0046983 IEA protein dimerization activity
GO:0051028 IEA mRNA transport
GO:0055085 TAS transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032179 Nup210-002 protein_coding Mus_musculus 0 5168
ENSMUST00000113509 Nup210-001 protein_coding Mus_musculus 0 2843
ENSMUST00000142951 Nup210-007 protein_coding Mus_musculus 0 2695
ENSMUST00000151437 Nup210-003 processed_transcript Mus_musculus 0 361

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