C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nucleoporin 210
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030091 Nup210 10090 - 6:91013068-91116829 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000032179 Nup210-002 91013068-91116829 protein_coding
  ENSMUST00000113509 Nup210-001 91013070-91116819 protein_coding
  ENSMUST00000123340 Nup210-009 91013317-91017429 processed_transcript
  ENSMUST00000139051 Nup210-004 91052582-91053620 processed_transcript
  ENSMUST00000141952 Nup210-006 91018745-91025506 processed_transcript
  ENSMUST00000142951 Nup210-007 91013070-91055384 protein_coding
  ENSMUST00000148397 Nup210-008 91018924-91024049 processed_transcript
  ENSMUST00000151437 Nup210-003 91060715-91065844 processed_transcript
  ENSMUST00000153350 Nup210-005 91026580-91030258 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032179ENSMUST00000113509ENSMUST00000141952ENSMUST00000142951
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032179 1.932±1.71 0.792±0.24 0.231±0.01 4.504±3.92 9.064±4.02 3.291±0.22 0.468±0.10 2.587±0.33 5.541±4.91 6.147±0.96 6.125±1.12 2.121±0.58 3.160±2.00 1.220±0.41
ENSMUST00000113509 N/A N/A N/A 1.577±0.00 N/A N/A N/A N/A N/A N/A N/A 1.304±0.00 N/A 0.204±0.00
ENSMUST00000141952 N/A N/A N/A 20.229±0.00 N/A N/A N/A N/A N/A N/A N/A 13.175±0.00 25.457±10.58 1.418±0.00
ENSMUST00000142951 N/A N/A 0.207±0.00 1.992±0.00 N/A 1.482±0.25 N/A 0.821±0.00 1.999±1.33 N/A N/A 0.993±0.23 4.220±1.51 0.188±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00051B CIL_00051B_0002 CGP 6:90659598-91116829
CIL_000518 CIL_000518_0002 CGP 6:91013068-91174692

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005635 IDA nuclear envelope
GO:0005643 ISO nuclear pore
GO:0005783 IEA endoplasmic reticulum
GO:0015031 IEA protein transport
GO:0046983 IEA protein dimerization activity
GO:0051028 IEA mRNA transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063333 nup210 nucleoporin 210 protein_coding Danio_rerio
ENSG00000132182 NUP210 nucleoporin 210kDa protein_coding Homo_sapiens

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