C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00051B_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000144711-ENSG00000132182 CGP 9606 3:12897220-13420309
GeneTranscriptPositionBiotype
ENSG00000132182 (NUP210)
nucleoporin 210kDa 		ENST00000254508 (NUP210-001) 13316235-13420309 protein_coding
ENST00000420141 (NUP210-002) 13351663-13420309 retained_intron
ENST00000479519 (NUP210-003) 13351661-13354694 retained_intron
ENST00000485755 (NUP210-004) 13336809-13341141 processed_transcript
ENSG00000144711 (IQSEC1)
IQ motif and Sec7 domain 1 		ENST00000273221 (IQSEC1-001) 12897220-12967668 protein_coding
ENST00000473088 (IQSEC1-004) 12936551-12995126 processed_transcript
ENST00000474467 (IQSEC1-005) 12960277-12967460 processed_transcript
ENST00000613206 (IQSEC1-003) 12900849-13073117 protein_coding
ENST00000618604 (IQSEC1-002) 12900577-12987036 protein_coding
ENSG00000231362 (RP11-715I4.1)
 ENST00000445577 (RP11-715I4.1-001) 13052967-13053122 processed_pseudogene
CIL_00051B_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034312-ENSMUSG00000030091 CGP 10090 6:90659598-91116829
GeneTranscriptPositionBiotype
ENSMUSG00000030091 (Nup210)
nucleoporin 210 		ENSMUST00000032179 (Nup210-002) 91013068-91116829 protein_coding
ENSMUST00000113509 (Nup210-001) 91013070-91116819 protein_coding
ENSMUST00000123340 (Nup210-009) 91013317-91017429 processed_transcript
ENSMUST00000139051 (Nup210-004) 91052582-91053620 processed_transcript
ENSMUST00000141952 (Nup210-006) 91018745-91025506 processed_transcript
ENSMUST00000142951 (Nup210-007) 91013070-91055384 protein_coding
ENSMUST00000148397 (Nup210-008) 91018924-91024049 processed_transcript
ENSMUST00000151437 (Nup210-003) 91060715-91065844 processed_transcript
ENSMUST00000153350 (Nup210-005) 91026580-91030258 processed_transcript
ENSMUSG00000034312 (Iqsec1)
IQ motif and Sec7 domain 1 		ENSMUST00000101151 (Iqsec1-201) 90659598-90810123 protein_coding
ENSMUST00000101153 (Iqsec1-202) 90659598-90716529 protein_coding
ENSMUST00000133492 (Iqsec1-004) 90690662-90736687 processed_transcript
ENSMUST00000141434 (Iqsec1-005) 90662812-90667999 processed_transcript
ENSMUST00000146977 (Iqsec1-003) 90694599-90757550 processed_transcript
ENSMUST00000154198 (Iqsec1-006) 90662628-90668076 processed_transcript
ENSMUST00000156834 (Iqsec1-002) 90690532-90764141 protein_coding
ENSMUST00000189881 (Iqsec1-001) 90662346-90716529 protein_coding
ENSMUSG00000057370 (Rpl21-ps12)
ribosomal protein L21, pseudogene 12 		ENSMUST00000081668 (Rpl21-ps12-201) 90844978-90845460 processed_pseudogene
ENSMUSG00000072894 (Ppp1r2-ps2)
 ENSMUST00000096117 (Ppp1r2-ps2-201) 90905699-90906507 pseudogene
ENSMUSG00000093052 (Gm24816)
predicted gene, 24816 		ENSMUST00000175311 (Gm24816-201) 90681370-90681520 miRNA
ENSMUSG00000099662 (Ppp1r2-ps2)
protein phosphatase 1, regulatory (inhibitor) subunit 2, pseudogene 2 		ENSMUST00000117103 (Ppp1r2-ps2-001) 90905819-90906453 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00051B_0001ENSG00000132182ENST00000254508ENST00000420141ENST00000479519ENST00000485755ENSG00000144711ENST00000273221ENST00000473088ENST00000474467ENST00000613206ENST00000618604ENSG00000231362ENST00000445577CIL_00051B_0002ENSMUSG00000030091ENSMUST00000032179ENSMUST00000113509ENSMUST00000123340ENSMUST00000139051ENSMUST00000141952ENSMUST00000142951ENSMUST00000148397ENSMUST00000151437ENSMUST00000153350ENSMUSG00000034312ENSMUST00000101151ENSMUST00000101153ENSMUST00000133492ENSMUST00000141434ENSMUST00000146977ENSMUST00000154198ENSMUST00000156834ENSMUST00000189881ENSMUSG00000057370ENSMUST00000081668ENSMUSG00000072894ENSMUST00000096117ENSMUSG00000093052ENSMUST00000175311ENSMUSG00000099662ENSMUST00000117103
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00051B_0001ENSG00000132182ENST00000254508ENST00000420141ENSG00000144711ENST00000273221ENST00000613206ENST00000618604ENSG00000231362ENST00000445577CIL_00051B_0002ENSMUSG00000030091ENSMUST00000032179ENSMUST00000113509ENSMUST00000141952ENSMUST00000142951ENSMUSG00000034312ENSMUST00000101151ENSMUST00000101153ENSMUSG00000057370ENSMUST00000081668ENSMUSG00000072894ENSMUST00000096117ENSMUSG00000093052ENSMUST00000175311ENSMUSG00000099662ENSMUST00000117103
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000132182 ENST00000254508 0.145±0.00 3.947±0.00 N/A 0.729±0.42 0.508±0.07 0.231±0.00 0.334±0.00 0.951±0.68 1.382±1.09 2.282±0.00 0.946±0.00 1.543±0.99 3.283±0.80 2.151±0.16
ENST00000420141 N/A N/A N/A 0.272±0.00 1.061±0.00 N/A 0.132±0.00 N/A N/A N/A 0.298±0.00 N/A N/A N/A
ENST00000479519 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485755 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000144711 ENST00000273221 N/A 7.676±0.00 0.914±0.00 3.319±0.00 3.060±2.13 1.662±0.89 8.265±7.25 3.874±1.70 3.281±2.30 2.334±1.15 3.515±1.36 4.443±1.15 3.802±0.00 5.205±3.24
ENST00000473088 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474467 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000613206 N/A N/A N/A N/A N/A N/A 0.455±0.00 2.239±0.00 N/A N/A N/A N/A N/A N/A
ENST00000618604 N/A N/A N/A N/A 0.688±0.00 0.376±0.00 N/A N/A 1.605±0.00 N/A 2.731±1.68 5.204±0.00 N/A N/A
ENSG00000231362 ENST00000445577 0.473±0.00 0.599±0.00 N/A 0.248±0.00 0.234±0.00 0.553±0.00 0.217±0.00 0.360±0.00 N/A N/A 0.106±0.00 5.939±0.00 N/A 0.322±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030091 ENSMUST00000032179 1.932±1.71 0.792±0.24 0.231±0.01 4.504±3.92 9.064±4.02 3.291±0.22 0.468±0.10 2.587±0.33 5.541±4.91 6.147±0.96 6.125±1.12 2.121±0.58 3.160±2.00 1.220±0.41
ENSMUST00000113509 N/A N/A N/A 1.577±0.00 N/A N/A N/A N/A N/A N/A N/A 1.304±0.00 N/A 0.204±0.00
ENSMUST00000123340 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141952 N/A N/A N/A 20.229±0.00 N/A N/A N/A N/A N/A N/A N/A 13.175±0.00 25.457±10.58 1.418±0.00
ENSMUST00000142951 N/A N/A 0.207±0.00 1.992±0.00 N/A 1.482±0.25 N/A 0.821±0.00 1.999±1.33 N/A N/A 0.993±0.23 4.220±1.51 0.188±0.00
ENSMUST00000148397 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151437 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153350 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000034312 ENSMUST00000101151 4.444±0.00 4.666±1.16 4.191±0.00 14.874±7.70 9.230±4.25 5.499±0.00 4.731±1.00 9.223±2.73 2.386±1.49 7.596±3.27 N/A 7.071±0.82 2.869±0.00 3.990±1.63
ENSMUST00000101153 9.239±2.14 9.232±1.85 2.472±0.00 1.942±0.00 11.240±2.64 6.512±1.20 4.357±0.35 12.085±0.11 2.970±1.52 15.957±1.76 2.104±0.29 7.164±1.49 3.624±0.00 N/A
ENSMUST00000133492 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141434 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146977 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154198 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156834 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189881 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000057370 ENSMUST00000081668 N/A N/A 0.113±0.06 0.153±0.09 N/A N/A N/A N/A 0.064±0.05 N/A N/A 0.156±0.03 0.370±0.19 0.165±0.06
ENSMUSG00000072894 ENSMUST00000096117 0.078±0.02 0.066±0.01 0.114±0.05 0.073±0.01 0.153±0.09 0.094±0.03 0.093±0.00 0.111±0.03 0.075±0.03 0.082±0.03 0.054±0.00 0.173±0.11 0.121±0.07 3.355±0.32
ENSMUSG00000093052 ENSMUST00000175311 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.929±6.33 N/A
ENSMUSG00000099662 ENSMUST00000117103 N/A N/A N/A 0.337±0.21 N/A N/A 0.058±0.00 0.073±0.00 0.155±0.04 N/A N/A N/A N/A N/A

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