C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: integrin-linked kinase-associated serine/threonine phosphatase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000254654 ILKAP-001 ENSG00000132323 9606 - 2:238170401-238203729 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000254654
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000254654 6.221±0.00 1.352±0.00 7.804±3.94 7.558±0.00 5.531±2.89 1.156±0.56 14.645±0.00 4.142±2.01 8.218±0.00 15.822±0.00 14.737±6.15 11.298±3.68 15.169±11.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D3 CIL_0008D3_0001 VISTA 2:237594726-238198955
CIL_0003NK CIL_0003NK_0001 CGP 2:238158982-238203729
CIL_0006X3 CIL_0006X3_0001 CGP 2:238170401-238240662

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004722 IEA protein serine/threonine phosphatase activity
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0006470 IEA protein dephosphorylation
GO:0033262 IEA regulation of nuclear cell cycle DNA replication
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027534 Ilkap-001 protein_coding Mus_musculus 0 1517
ENSMUST00000187105 Ilkap-004 retained_intron Mus_musculus 0 1149
ENSMUST00000187049 Ilkap-002 nonsense_mediated_decay Mus_musculus 0 1142
ENSMUST00000191230 Ilkap-003 processed_transcript Mus_musculus 0 1002
ENSMUST00000186986 Ilkap-009 nonsense_mediated_decay Mus_musculus 0 675
ENSMUST00000190747 Ilkap-013 protein_coding Mus_musculus 0 593
ENSMUST00000187231 Ilkap-012 protein_coding Mus_musculus 0 553
ENSMUST00000186433 Ilkap-007 retained_intron Mus_musculus 0 475
ENSMUST00000190519 Ilkap-010 protein_coding Mus_musculus 0 451
ENSMUST00000187678 Ilkap-006 nonsense_mediated_decay Mus_musculus 0 374
ENSMUST00000185886 Ilkap-011 retained_intron Mus_musculus 0 339
ENSMUST00000187306 Ilkap-008 protein_coding Mus_musculus 0 219
ENSMUST00000189651 Ilkap-005 retained_intron Mus_musculus 0 215

Loading