C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: hyaluronan and proteoglycan link protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000132702 HAPLN2 9606 + 1:156619294-156625725 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000255039 HAPLN2-001 156619294-156625725 protein_coding
  ENST00000456112 HAPLN2-004 156619424-156624467 protein_coding
  ENST00000482204 HAPLN2-003 156619446-156623914 processed_transcript
  ENST00000487988 HAPLN2-002 156619331-156623790 processed_transcript
  ENST00000494218 HAPLN2-005 156624064-156625535 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000255039ENST00000456112ENST00000482204ENST00000487988ENST00000494218
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000255039 0.296±0.00 N/A 11.616±9.90 N/A 0.179±0.00 N/A 0.179±0.00 N/A N/A 0.150±0.00 0.140±0.07 0.226±0.00 0.358±0.00
ENST00000456112 N/A N/A 18.255±15.99 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482204 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.199±0.00
ENST00000487988 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.080±0.00 N/A N/A
ENST00000494218 0.440±0.00 1.985±0.00 42.113±0.00 0.063±0.00 0.635±0.00 1.023±0.00 1.016±0.00 0.157±0.00 0.348±0.00 0.764±0.00 0.298±0.14 0.665±0.55 1.491±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008JO CIL_0008JO_0001 VISTA 1:156202708-156805613
CIL_000850 CIL_000850_0001 VISTA 1:156360457-156965492
CIL_0000CX CIL_0000CX_0002 CGP 1:156619294-156659532

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005540 IEA hyaluronic acid binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0007155 IEA cell adhesion
GO:0008065 IEA establishment of blood-nerve barrier
GO:0031012 IEA extracellular matrix
GO:0085029 IEA extracellular matrix assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003903 hapln2 hyaluronan and proteoglycan link protein 2 protein_coding Danio_rerio
ENSMUSG00000004894 Hapln2 hyaluronan and proteoglycan link protein 2 protein_coding Mus_musculus

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