C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: microtubule associated monooxygenase, calponin and LIM domain containing 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000133816 MICAL2 9606 + 11:12094008-12263789 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000256194 MICAL2-001 12110591-12263785 protein_coding
  ENST00000342902 MICAL2-201 12138390-12263789 protein_coding
  ENST00000379612 MICAL2-202 12162079-12263789 protein_coding
  ENST00000524685 MICAL2-023 12161443-12204347 protein_coding
  ENST00000524730 MICAL2-020 12213255-12216393 retained_intron
  ENST00000525075 MICAL2-013 12239460-12257233 retained_intron
  ENST00000525119 MICAL2-024 12161446-12204387 protein_coding
  ENST00000525216 MICAL2-015 12242182-12242984 processed_transcript
  ENST00000525444 MICAL2-017 12259689-12263781 retained_intron
  ENST00000525618 MICAL2-004 12252532-12263787 retained_intron
  ENST00000525979 MICAL2-027 12243200-12256968 processed_transcript
  ENST00000526065 MICAL2-026 12094017-12162420 protein_coding
  ENST00000526475 MICAL2-014 12226207-12244034 processed_transcript
  ENST00000526604 MICAL2-012 12256842-12260748 processed_transcript
  ENST00000526672 MICAL2-016 12249941-12256909 processed_transcript
  ENST00000527195 MICAL2-019 12195945-12208146 processed_transcript
  ENST00000527546 MICAL2-007 12138388-12262919 protein_coding
  ENST00000528931 MICAL2-006 12162156-12260172 retained_intron
  ENST00000529562 MICAL2-021 12225585-12227098 processed_transcript
  ENST00000530021 MICAL2-005 12253234-12263782 retained_intron
  ENST00000530691 MICAL2-003 12207725-12263785 retained_intron
  ENST00000530823 MICAL2-011 12116696-12162166 protein_coding
  ENST00000531732 MICAL2-002 12110605-12208369 retained_intron
  ENST00000532166 MICAL2-018 12195945-12197811 processed_transcript
  ENST00000532179 MICAL2-008 12094008-12204280 protein_coding
  ENST00000532420 MICAL2-010 12121475-12162419 protein_coding
  ENST00000532945 MICAL2-009 12094128-12096221 processed_transcript
  ENST00000533219 MICAL2-022 12224438-12227193 retained_intron
  ENST00000533389 MICAL2-025 12161868-12204290 protein_coding
  ENST00000534563 MICAL2-028 12242321-12259942 processed_transcript
  ENST00000537344 MICAL2-203 12138390-12263789 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000256194ENST00000342902ENST00000379612ENST00000526475ENST00000527546ENST00000530021ENST00000530691ENST00000531732ENST00000534563ENST00000537344
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000256194 N/A N/A N/A 27.031±0.00 N/A N/A 6.568±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000342902 N/A N/A N/A 9.621±3.18 N/A N/A 5.018±0.00 N/A N/A N/A 17.276±0.00 N/A N/A N/A
ENST00000379612 1.347±0.00 5.047±0.00 N/A N/A 1.433±0.00 4.016±0.38 N/A 3.098±0.00 4.282±0.00 9.436±0.00 N/A 2.605±1.63 2.450±0.07 8.732±2.43
ENST00000526475 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 52.895±0.00 16.766±0.00 65.221±0.00
ENST00000527546 N/A N/A 1.016±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 3.086±0.00 N/A N/A
ENST00000530021 N/A N/A 0.422±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530691 N/A N/A N/A N/A N/A N/A 0.366±0.00 N/A 1.513±0.47 2.742±0.00 N/A 1.813±0.51 N/A 4.445±0.00
ENST00000531732 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.676±0.00 N/A N/A N/A
ENST00000534563 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.071±0.00 N/A N/A N/A
ENST00000537344 N/A N/A N/A N/A N/A N/A 0.563±0.00 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008T3 CIL_0008T3_0001 VISTA 11:11882278-12483702
CIL_0008YS CIL_0008YS_0001 VISTA 11:11899653-12500760
CIL_0007SQ CIL_0007SQ_0001 VISTA 11:11959946-12561868
CIL_0004J2 CIL_0004J2_0001 CGP 11:11963106-12263789
CIL_0004J1 CIL_0004J1_0001 CGP 11:12094008-12359144

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001947 ISS heart looping
GO:0003779 ISS actin binding
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0007010 IDA cytoskeleton organization
GO:0007507 ISS heart development
GO:0008270 IEA zinc ion binding
GO:0010735 IMP positive regulation of transcription via serum response element binding
GO:0016491 IEA oxidoreductase activity
GO:0016709 ISS oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen
GO:0019417 ISS sulfur oxidation
GO:0030042 ISS actin filament depolymerization
GO:0043914 IDA NADPH:sulfur oxidoreductase activity
GO:0050660 IEA flavin adenine dinucleotide binding
GO:0055114 ISS oxidation-reduction process
GO:0071949 ISS FAD binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020395 mical2b microtubule associated monooxygenase, calponin and LIM domain containing 2b protein_coding Danio_rerio
ENSDARG00000075608 mical2a microtubule associated monooxygenase, calponin and LIM domain containing 2a protein_coding Danio_rerio
ENSMUSG00000038244 Mical2 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein_coding Mus_musculus

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