C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: microtubule associated monooxygenase, calponin and LIM domain containing 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038244 Mical2 10090 + 7:112225856-112355194 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000037991 Mical2-004 112271299-112353975 protein_coding
  ENSMUST00000050149 Mical2-001 112225856-112355194 protein_coding
  ENSMUST00000106647 Mical2-002 112225890-112315415 protein_coding
  ENSMUST00000106648 Mical2-005 112225890-112348368 protein_coding
  ENSMUST00000144509 Mical2-006 112346729-112355194 protein_coding
  ENSMUST00000150428 Mical2-003 112316029-112347491 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000037991ENSMUST00000050149ENSMUST00000106647ENSMUST00000144509
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000037991 N/A N/A N/A 94.567±0.00 N/A N/A 3.817±0.00 N/A N/A N/A 17.929±0.00 N/A N/A N/A
ENSMUST00000050149 10.125±4.59 2.592±0.52 9.503±0.13 0.353±0.12 6.275±0.55 17.468±1.17 5.344±1.43 2.751±0.29 2.419±1.21 29.242±1.54 2.000±0.53 12.790±3.41 11.163±5.25 3.098±1.24
ENSMUST00000106647 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.108±0.00 N/A N/A N/A
ENSMUST00000144509 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.700±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008T3 CIL_0008T3_0002 VISTA 7:111980454-112581088
CIL_0008YS CIL_0008YS_0002 VISTA 7:111997825-112599422
CIL_0007SQ CIL_0007SQ_0002 VISTA 7:112051476-112653289
CIL_0004J2 CIL_0004J2_0002 CGP 7:112116019-112355194
CIL_0004J1 CIL_0004J1_0002 CGP 7:112225856-112413104

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001947 ISS heart looping
GO:0003779 ISS actin binding
GO:0005634 ISS nucleus
GO:0007010 ISS cytoskeleton organization
GO:0007507 ISS heart development
GO:0008270 IEA zinc ion binding
GO:0010735 ISS positive regulation of transcription via serum response element binding
GO:0016491 IEA oxidoreductase activity
GO:0016709 ISS oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen
GO:0019417 IDA sulfur oxidation
GO:0030042 ISS actin filament depolymerization
GO:0043914 ISS NADPH:sulfur oxidoreductase activity
GO:0055114 ISS oxidation-reduction process
GO:0071949 ISS FAD binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020395 mical2b microtubule associated monooxygenase, calponin and LIM domain containing 2b protein_coding Danio_rerio
ENSDARG00000075608 mical2a microtubule associated monooxygenase, calponin and LIM domain containing 2a protein_coding Danio_rerio
ENSG00000133816 MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein_coding Homo_sapiens

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