C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: diphthamine biosynthesis 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000134146 DPH6 9606 - 15:35217345-35546193 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000256538 DPH6-001 35370882-35546168 protein_coding
  ENST00000440392 DPH6-002 35518994-35546192 protein_coding
  ENST00000558266 DPH6-009 35372107-35454760 protein_coding
  ENST00000558973 DPH6-008 35330801-35410858 processed_transcript
  ENST00000559585 DPH6-007 35489969-35546153 processed_transcript
  ENST00000559784 DPH6-006 35381835-35542491 processed_transcript
  ENST00000560386 DPH6-003 35217345-35410851 processed_transcript
  ENST00000560526 DPH6-005 35538082-35546193 retained_intron
  ENST00000561411 DPH6-004 35381832-35546165 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000256538ENST00000440392ENST00000558266ENST00000559585ENST00000559784ENST00000560386ENST00000560526ENST00000561411
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000256538 0.977±0.00 1.041±0.00 N/A 0.279±0.00 0.612±0.00 1.106±0.12 1.110±0.45 0.900±0.62 0.196±0.00 0.860±0.00 0.382±0.11 1.841±0.89 1.165±0.26 1.172±0.71
ENST00000440392 N/A 0.163±0.00 N/A N/A 0.133±0.00 0.660±0.00 0.370±0.00 N/A 0.070±0.00 0.377±0.00 N/A N/A 0.118±0.00 N/A
ENST00000558266 N/A N/A N/A N/A N/A N/A N/A 1.651±0.87 0.765±0.00 1.518±0.00 2.099±0.00 N/A 1.220±0.28 N/A
ENST00000559585 N/A N/A N/A 2.900±0.00 N/A N/A N/A N/A N/A N/A 2.038±0.00 N/A N/A 0.940±0.00
ENST00000559784 4.017±0.00 N/A N/A N/A N/A N/A N/A N/A 1.197±0.00 N/A N/A 0.672±0.00 0.760±0.00 N/A
ENST00000560386 N/A 0.233±0.00 N/A 0.226±0.05 0.449±0.00 0.164±0.00 N/A 0.194±0.02 N/A 0.924±0.00 N/A N/A N/A 0.208±0.00
ENST00000560526 N/A N/A N/A N/A N/A 2.921±0.00 4.356±0.00 0.601±0.00 3.118±0.00 N/A 1.390±0.00 N/A N/A N/A
ENST00000561411 2.592±0.00 1.241±0.00 3.347±0.00 2.601±0.29 2.723±0.00 5.916±0.00 3.016±0.00 1.773±0.65 N/A 3.889±0.00 1.360±0.00 7.256±4.61 1.948±0.85 2.437±1.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008IU CIL_0008IU_0001 VISTA 15:34953121-35554645
CIL_0006HH CIL_0006HH_0001 CGP 15:34978341-35546193
CIL_0006HI CIL_0006HI_0001 CGP 15:35217345-36810248

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0017178 TAS diphthine-ammonia ligase activity
GO:0017183 IEA peptidyl-diphthamide biosynthetic process from peptidyl-histidine

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042839 dph6 DPH6 homolog (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000057147 Dph6 diphthamine biosynthesis 6 protein_coding Mus_musculus

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