C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: diphthamine biosynthesis 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000057147 Dph6 10090 - 2:114516416-114654964 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000028640 Dph6-002 114516416-114654953 protein_coding
  ENSMUST00000055144 Dph6-003 114516644-114654887 protein_coding
  ENSMUST00000102542 Dph6-001 114516420-114654964 protein_coding
  ENSMUST00000138106 Dph6-006 114518145-114545891 processed_transcript
  ENSMUST00000138975 Dph6-005 114642075-114654905 retained_intron
  ENSMUST00000150447 Dph6-004 114521227-114654964 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028640ENSMUST00000055144ENSMUST00000102542ENSMUST00000138106ENSMUST00000150447
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028640 1.781±0.60 8.450±3.18 N/A 1.052±0.00 2.325±0.60 1.690±0.56 0.985±0.34 2.275±1.05 1.142±0.41 2.905±0.42 0.298±0.05 7.679±3.66 1.930±0.11 0.583±0.06
ENSMUST00000055144 2.133±0.00 6.769±1.88 N/A 0.190±0.00 2.088±0.05 0.646±0.00 0.624±0.00 1.526±0.29 N/A 1.999±0.05 0.181±0.00 5.723±2.11 2.588±0.00 0.221±0.00
ENSMUST00000102542 2.673±1.27 3.947±0.86 4.925±0.32 2.321±1.07 1.326±0.38 1.542±0.68 0.793±0.00 2.047±0.52 3.060±1.47 3.031±1.30 0.957±0.26 3.793±1.02 4.044±2.30 2.295±1.08
ENSMUST00000138106 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.744±0.00
ENSMUST00000150447 N/A N/A 1.093±0.06 0.589±0.39 N/A N/A 0.516±0.09 N/A 0.818±0.30 N/A 0.339±0.07 1.418±0.63 N/A 0.590±0.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008IU CIL_0008IU_0002 VISTA 2:114111449-114713021
CIL_0006HH CIL_0006HH_0002 CGP 2:114193461-114654964
CIL_0007MM CIL_0007MM_0002 UCNEbase 2:114412124-116821493
CIL_0008V7 CIL_0008V7_0002 VISTA 2:114439395-115040295
CIL_0006HI CIL_0006HI_0002 CGP 2:114516416-115778768

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005524 IEA ATP binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0017178 IEA diphthine-ammonia ligase activity
GO:0017183 IEA peptidyl-diphthamide biosynthetic process from peptidyl-histidine

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042839 dph6 DPH6 homolog (S. cerevisiae) protein_coding Danio_rerio
ENSG00000134146 DPH6 diphthamine biosynthesis 6 protein_coding Homo_sapiens

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