C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006HH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000198146-ENSG00000134146 CGP 9606 15:34978341-35546193
GeneTranscriptPositionBiotype
ENSG00000134146 (DPH6)
diphthamine biosynthesis 6 		ENST00000256538 (DPH6-001) 35370882-35546168 protein_coding
ENST00000440392 (DPH6-002) 35518994-35546192 protein_coding
ENST00000558266 (DPH6-009) 35372107-35454760 protein_coding
ENST00000558973 (DPH6-008) 35330801-35410858 processed_transcript
ENST00000559585 (DPH6-007) 35489969-35546153 processed_transcript
ENST00000559784 (DPH6-006) 35381835-35542491 processed_transcript
ENST00000560386 (DPH6-003) 35217345-35410851 processed_transcript
ENST00000560526 (DPH6-005) 35538082-35546193 retained_intron
ENST00000561411 (DPH6-004) 35381832-35546165 protein_coding
ENSG00000198146 (ZNF770)
zinc finger protein 770 		ENST00000356321 (ZNF770-001) 34978341-34988287 protein_coding
ENST00000559564 (ZNF770-002) 34983038-34988225 protein_coding
ENSG00000255192 (NANOGP8)
Nanog homeobox pseudogene 8 		ENST00000528386 (NANOGP8-001) 35084195-35085110 processed_pseudogene
ENSG00000259181 (RP11-463I20.3)
 ENST00000560140 (RP11-463I20.3-001) 34993646-35003221 lincRNA
ENSG00000259336 (RP11-323I15.5)
 ENST00000559246 (RP11-323I15.5-001) 35099022-35169698 lincRNA
ENSG00000259397 (RP11-323I15.2)
 ENST00000594613 (RP11-323I15.2-001) 35092481-35093210 processed_pseudogene
ENSG00000259411 (HNRNPA1P45)
heterogeneous nuclear ribonucleoprotein A1 pseudogene 45 		ENST00000560893 (HNRNPA1P45-001) 35400691-35401768 processed_pseudogene
ENSG00000259516 (ANP32AP1)
acidic (leucine-rich) nuclear phosphoprotein 32 family, member A pseudogene 1 		ENST00000559548 (ANP32AP1-001) 35237326-35238062 transcribed_processed_pseudogene
ENST00000560832 (ANP32AP1-002) 35181799-35238197 processed_transcript
ENSG00000259585 (RBM17P4)
RNA binding motif protein 17 pseudogene 4 		ENST00000558517 (RBM17P4-001) 35298249-35299440 processed_pseudogene
ENSG00000259587 (RP11-463I20.2)
 ENST00000560683 (RP11-463I20.2-001) 35008469-35011191 lincRNA
ENSG00000259592 (PRELID1P4)
PRELI domain containing 1 pseudogene 4 		ENST00000561466 (PRELID1P4-001) 35121573-35122084 processed_pseudogene
ENSG00000259665 (RP11-323I15.3)
 ENST00000558497 (RP11-323I15.3-001) 35081144-35081513 processed_pseudogene
ENSG00000259688 (RP11-139F4.2)
 ENST00000557918 (RP11-139F4.2-001) 35396221-35396444 processed_pseudogene
ENSG00000259710 (NUTF2P6)
nuclear transport factor 2 pseudogene 6 		ENST00000560892 (NUTF2P6-001) 35282596-35282980 processed_pseudogene
ENSG00000265102 (MIR3942)
microRNA 3942 		ENST00000585264 (MIR3942-201) 35372256-35372364 miRNA
ENSG00000279364 (RP11-463I20.1)
 ENST00000623582 (RP11-463I20.1-001) 34978351-34980084 TEC
ENSG00000280396 (RP11-463I20.4)
 ENST00000624413 (RP11-463I20.4-001) 34999902-35000270 TEC
CIL_0006HH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000040321-ENSMUSG00000057147 CGP 10090 2:114193461-114654964
GeneTranscriptPositionBiotype
ENSMUSG00000040321 (Zfp770)
zinc finger protein 770 		ENSMUST00000050668 (Zfp770-001) 114193461-114201469 protein_coding
ENSMUST00000123562 (Zfp770-002) 114198560-114201440 processed_transcript
ENSMUSG00000057147 (Dph6)
diphthamine biosynthesis 6 		ENSMUST00000028640 (Dph6-002) 114516416-114654953 protein_coding
ENSMUST00000055144 (Dph6-003) 114516644-114654887 protein_coding
ENSMUST00000102542 (Dph6-001) 114516420-114654964 protein_coding
ENSMUST00000138106 (Dph6-006) 114518145-114545891 processed_transcript
ENSMUST00000138975 (Dph6-005) 114642075-114654905 retained_intron
ENSMUST00000150447 (Dph6-004) 114521227-114654964 retained_intron
ENSMUSG00000084620 (Gm25103)
predicted gene, 25103 		ENSMUST00000122671 (Gm25103-201) 114270111-114270428 misc_RNA
ENSMUSG00000084785 (Gm13972)
predicted gene 13972 		ENSMUST00000153726 (Gm13972-001) 114654425-114697839 processed_transcript
ENSMUSG00000101266 (RP23-55M21.1)
predicted gene 29234 		ENSMUST00000187452 (RP23-55M21.1-001) 114272174-114273435 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006HH_0001ENSG00000134146ENST00000256538ENST00000440392ENST00000558266ENST00000559585ENST00000559784ENST00000560386ENST00000560526ENST00000561411ENSG00000198146ENST00000356321ENSG00000255192ENST00000528386ENSG00000259181ENST00000560140ENSG00000259336ENST00000559246ENSG00000259397ENST00000594613ENSG00000259411ENST00000560893ENSG00000259516ENST00000559548ENST00000560832ENSG00000259585ENST00000558517ENSG00000259587ENST00000560683ENSG00000259592ENST00000561466ENSG00000259665ENST00000558497ENSG00000259688ENST00000557918ENSG00000259710ENST00000560892ENSG00000265102ENST00000585264ENSG00000279364ENST00000623582ENSG00000280396ENST00000624413CIL_0006HH_0002ENSMUSG00000040321ENSMUST00000050668ENSMUSG00000057147ENSMUST00000028640ENSMUST00000055144ENSMUST00000102542ENSMUST00000138106ENSMUST00000150447ENSMUSG00000084620ENSMUST00000122671ENSMUSG00000084785ENSMUST00000153726ENSMUSG00000101266ENSMUST00000187452
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000134146 ENST00000256538 0.977±0.00 1.041±0.00 N/A 0.279±0.00 0.612±0.00 1.106±0.12 1.110±0.45 0.900±0.62 0.196±0.00 0.860±0.00 0.382±0.11 1.841±0.89 1.165±0.26 1.172±0.71
ENST00000440392 N/A 0.163±0.00 N/A N/A 0.133±0.00 0.660±0.00 0.370±0.00 N/A 0.070±0.00 0.377±0.00 N/A N/A 0.118±0.00 N/A
ENST00000558266 N/A N/A N/A N/A N/A N/A N/A 1.651±0.87 0.765±0.00 1.518±0.00 2.099±0.00 N/A 1.220±0.28 N/A
ENST00000558973 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559585 N/A N/A N/A 2.900±0.00 N/A N/A N/A N/A N/A N/A 2.038±0.00 N/A N/A 0.940±0.00
ENST00000559784 4.017±0.00 N/A N/A N/A N/A N/A N/A N/A 1.197±0.00 N/A N/A 0.672±0.00 0.760±0.00 N/A
ENST00000560386 N/A 0.233±0.00 N/A 0.226±0.05 0.449±0.00 0.164±0.00 N/A 0.194±0.02 N/A 0.924±0.00 N/A N/A N/A 0.208±0.00
ENST00000560526 N/A N/A N/A N/A N/A 2.921±0.00 4.356±0.00 0.601±0.00 3.118±0.00 N/A 1.390±0.00 N/A N/A N/A
ENST00000561411 2.592±0.00 1.241±0.00 3.347±0.00 2.601±0.29 2.723±0.00 5.916±0.00 3.016±0.00 1.773±0.65 N/A 3.889±0.00 1.360±0.00 7.256±4.61 1.948±0.85 2.437±1.07
ENSG00000198146 ENST00000356321 N/A N/A 3.237±0.00 0.963±0.00 0.678±0.00 1.050±0.00 0.821±0.00 2.476±0.00 1.508±0.00 3.098±1.68 N/A 1.832±0.15 1.917±0.51 2.361±0.00
ENST00000559564 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000255192 ENST00000528386 N/A N/A 0.107±0.00 N/A 0.278±0.00 N/A 0.098±0.00 0.069±0.00 0.152±0.00 N/A N/A 0.382±0.00 0.041±0.00 0.316±0.00
ENSG00000259181 ENST00000560140 N/A N/A N/A N/A 0.195±0.00 N/A 0.179±0.00 0.074±0.00 N/A N/A N/A 0.088±0.00 N/A 0.298±0.00
ENSG00000259336 ENST00000559246 N/A 0.051±0.00 1.004±0.00 0.064±0.03 0.034±0.00 0.446±0.00 0.021±0.00 N/A 0.249±0.00 N/A N/A 0.179±0.21 N/A 0.322±0.19
ENSG00000259397 ENST00000594613 0.027±0.00 0.086±0.00 0.865±0.00 0.080±0.05 0.502±0.00 0.027±0.00 0.109±0.03 N/A 0.624±0.00 0.225±0.00 0.026±0.00 0.065±0.00 0.128±0.03 0.484±0.08
ENSG00000259411 ENST00000560893 N/A 0.013±0.00 0.132±0.00 0.124±0.00 0.094±0.07 0.139±0.11 0.059±0.02 0.013±0.00 0.188±0.00 0.076±0.05 0.012±0.00 0.027±0.00 N/A 0.012±0.00
ENSG00000259516 ENST00000559548 N/A N/A 0.058±0.00 0.069±0.00 N/A 0.063±0.00 0.063±0.00 N/A 0.021±0.00 N/A N/A N/A N/A 0.054±0.00
ENST00000560832 0.098±0.00 0.075±0.00 N/A N/A 0.076±0.00 N/A N/A 0.078±0.00 0.058±0.00 0.015±0.00 N/A 0.040±0.00 0.036±0.01 N/A
ENSG00000259585 ENST00000558517 N/A 0.143±0.00 0.431±0.00 0.133±0.00 0.064±0.01 0.218±0.00 0.035±0.02 0.013±0.00 0.257±0.00 0.230±0.00 N/A 0.271±0.15 N/A 1.137±0.00
ENSG00000259587 ENST00000560683 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.107±0.00 0.146±0.02 1.030±0.63
ENSG00000259592 ENST00000561466 0.087±0.00 0.608±0.00 N/A 0.390±0.23 0.102±0.00 0.648±0.56 0.057±0.01 0.301±0.00 0.229±0.05 0.362±0.31 0.398±0.36 0.339±0.17 0.126±0.03 0.344±0.00
ENSG00000259665 ENST00000558497 N/A 0.155±0.00 N/A 0.031±0.00 0.058±0.00 N/A 0.029±0.00 N/A N/A N/A N/A N/A N/A 0.252±0.00
ENSG00000259688 ENST00000557918 N/A N/A 1.247±0.00 N/A 0.261±0.00 N/A N/A N/A N/A N/A N/A 1.579±0.00 N/A N/A
ENSG00000259710 ENST00000560892 0.077±0.00 N/A 0.219±0.00 0.466±0.00 0.523±0.00 0.111±0.00 0.312±0.00 0.717±0.00 0.070±0.00 N/A N/A 0.640±0.20 N/A N/A
ENSG00000265102 ENST00000585264 N/A N/A N/A 0.188±0.00 N/A N/A N/A 0.921±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000279364 ENST00000623582 N/A 10.150±0.00 3.229±0.00 11.449±0.00 N/A 3.950±0.00 2.108±0.00 12.630±7.69 N/A 5.088±0.00 1.242±0.00 10.221±4.93 5.885±0.00 12.663±5.72
ENSG00000280396 ENST00000624413 0.074±0.00 0.244±0.00 1.538±0.00 0.038±0.00 0.167±0.00 0.030±0.00 0.131±0.00 0.202±0.00 0.030±0.00 0.198±0.00 N/A N/A N/A 0.067±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000040321 ENSMUST00000050668 1.769±0.48 0.728±0.13 2.723±0.03 3.116±0.34 1.361±0.32 0.737±0.17 2.748±0.42 1.306±0.21 1.553±0.79 1.519±0.14 4.211±0.52 1.541±0.82 1.554±0.40 1.156±0.27
ENSMUST00000123562 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000057147 ENSMUST00000028640 1.781±0.60 8.450±3.18 N/A 1.052±0.00 2.325±0.60 1.690±0.56 0.985±0.34 2.275±1.05 1.142±0.41 2.905±0.42 0.298±0.05 7.679±3.66 1.930±0.11 0.583±0.06
ENSMUST00000055144 2.133±0.00 6.769±1.88 N/A 0.190±0.00 2.088±0.05 0.646±0.00 0.624±0.00 1.526±0.29 N/A 1.999±0.05 0.181±0.00 5.723±2.11 2.588±0.00 0.221±0.00
ENSMUST00000102542 2.673±1.27 3.947±0.86 4.925±0.32 2.321±1.07 1.326±0.38 1.542±0.68 0.793±0.00 2.047±0.52 3.060±1.47 3.031±1.30 0.957±0.26 3.793±1.02 4.044±2.30 2.295±1.08
ENSMUST00000138106 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.744±0.00
ENSMUST00000138975 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150447 N/A N/A 1.093±0.06 0.589±0.39 N/A N/A 0.516±0.09 N/A 0.818±0.30 N/A 0.339±0.07 1.418±0.63 N/A 0.590±0.41
ENSMUSG00000084620 ENSMUST00000122671 N/A N/A N/A 0.099±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000084785 ENSMUST00000153726 N/A N/A 0.002±0.00 0.003±0.00 N/A N/A N/A 0.015±0.00 0.002±0.00 N/A N/A 0.005±0.00 0.002±0.00 N/A
ENSMUSG00000101266 ENSMUST00000187452 N/A N/A N/A 0.025±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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