C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008IU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs776 VISTA 9606 15:34953121-35554645
GeneTranscriptPositionBiotype
ENSG00000021776 (AQR)
aquarius intron-binding spliceosomal factor 		ENST00000156471 (AQR-001) 34851782-34969839 protein_coding
ENST00000543879 (AQR-002) 34856351-34969733 nonsense_mediated_decay
ENST00000558202 (AQR-005) 34948134-34964402 retained_intron
ENST00000559090 (AQR-003) 34856500-34870264 retained_intron
ENST00000559767 (AQR-006) 34856827-34863224 retained_intron
ENST00000560117 (AQR-004) 34944304-34964453 protein_coding
ENSG00000134146 (DPH6)
diphthamine biosynthesis 6 		ENST00000256538 (DPH6-001) 35370882-35546168 protein_coding
ENST00000440392 (DPH6-002) 35518994-35546192 protein_coding
ENST00000558266 (DPH6-009) 35372107-35454760 protein_coding
ENST00000558973 (DPH6-008) 35330801-35410858 processed_transcript
ENST00000559585 (DPH6-007) 35489969-35546153 processed_transcript
ENST00000559784 (DPH6-006) 35381835-35542491 processed_transcript
ENST00000560386 (DPH6-003) 35217345-35410851 processed_transcript
ENST00000560526 (DPH6-005) 35538082-35546193 retained_intron
ENST00000561411 (DPH6-004) 35381832-35546165 protein_coding
ENSG00000198146 (ZNF770)
zinc finger protein 770 		ENST00000356321 (ZNF770-001) 34978341-34988287 protein_coding
ENST00000559564 (ZNF770-002) 34983038-34988225 protein_coding
ENSG00000248079 (DPH6-AS1)
DPH6 antisense RNA 1 (head to head) 		ENST00000501169 (DPH6-AS1-001) 35546195-35859001 lincRNA
ENST00000559210 (DPH6-AS1-003) 35546383-35858303 lincRNA
ENST00000560866 (DPH6-AS1-002) 35856477-35858302 lincRNA
ENSG00000255192 (NANOGP8)
Nanog homeobox pseudogene 8 		ENST00000528386 (NANOGP8-001) 35084195-35085110 processed_pseudogene
ENSG00000259181 (RP11-463I20.3)
 ENST00000560140 (RP11-463I20.3-001) 34993646-35003221 lincRNA
ENSG00000259336 (RP11-323I15.5)
 ENST00000559246 (RP11-323I15.5-001) 35099022-35169698 lincRNA
ENSG00000259397 (RP11-323I15.2)
 ENST00000594613 (RP11-323I15.2-001) 35092481-35093210 processed_pseudogene
ENSG00000259411 (HNRNPA1P45)
heterogeneous nuclear ribonucleoprotein A1 pseudogene 45 		ENST00000560893 (HNRNPA1P45-001) 35400691-35401768 processed_pseudogene
ENSG00000259516 (ANP32AP1)
acidic (leucine-rich) nuclear phosphoprotein 32 family, member A pseudogene 1 		ENST00000559548 (ANP32AP1-001) 35237326-35238062 transcribed_processed_pseudogene
ENST00000560832 (ANP32AP1-002) 35181799-35238197 processed_transcript
ENSG00000259585 (RBM17P4)
RNA binding motif protein 17 pseudogene 4 		ENST00000558517 (RBM17P4-001) 35298249-35299440 processed_pseudogene
ENSG00000259587 (RP11-463I20.2)
 ENST00000560683 (RP11-463I20.2-001) 35008469-35011191 lincRNA
ENSG00000259592 (PRELID1P4)
PRELI domain containing 1 pseudogene 4 		ENST00000561466 (PRELID1P4-001) 35121573-35122084 processed_pseudogene
ENSG00000259665 (RP11-323I15.3)
 ENST00000558497 (RP11-323I15.3-001) 35081144-35081513 processed_pseudogene
ENSG00000259688 (RP11-139F4.2)
 ENST00000557918 (RP11-139F4.2-001) 35396221-35396444 processed_pseudogene
ENSG00000259710 (NUTF2P6)
nuclear transport factor 2 pseudogene 6 		ENST00000560892 (NUTF2P6-001) 35282596-35282980 processed_pseudogene
ENSG00000265102 (MIR3942)
microRNA 3942 		ENST00000585264 (MIR3942-201) 35372256-35372364 miRNA
ENSG00000279364 (RP11-463I20.1)
 ENST00000623582 (RP11-463I20.1-001) 34978351-34980084 TEC
ENSG00000280396 (RP11-463I20.4)
 ENST00000624413 (RP11-463I20.4-001) 34999902-35000270 TEC

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0008IU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs776 VISTA 10090 2:114111449-114713021
GeneTranscriptPositionBiotype
ENSMUSG00000040321 (Zfp770)
zinc finger protein 770 		ENSMUST00000050668 (Zfp770-001) 114193461-114201469 protein_coding
ENSMUST00000123562 (Zfp770-002) 114198560-114201440 processed_transcript
ENSMUSG00000040383 (Aqr)
aquarius 		ENSMUST00000043160 (Aqr-001) 114101170-114175339 protein_coding
ENSMUST00000102543 (Aqr-004) 114105162-114175277 protein_coding
ENSMUST00000125460 (Aqr-005) 114133368-114175246 processed_transcript
ENSMUST00000126701 (Aqr-009) 114132987-114141143 processed_transcript
ENSMUST00000129504 (Aqr-003) 114158599-114175338 processed_transcript
ENSMUST00000131785 (Aqr-002) 114152743-114175338 processed_transcript
ENSMUST00000140441 (Aqr-006) 114112126-114119187 processed_transcript
ENSMUST00000147191 (Aqr-007) 114170045-114181048 processed_transcript
ENSMUST00000154317 (Aqr-008) 114170045-114187024 processed_transcript
ENSMUSG00000057147 (Dph6)
diphthamine biosynthesis 6 		ENSMUST00000028640 (Dph6-002) 114516416-114654953 protein_coding
ENSMUST00000055144 (Dph6-003) 114516644-114654887 protein_coding
ENSMUST00000102542 (Dph6-001) 114516420-114654964 protein_coding
ENSMUST00000138106 (Dph6-006) 114518145-114545891 processed_transcript
ENSMUST00000138975 (Dph6-005) 114642075-114654905 retained_intron
ENSMUST00000150447 (Dph6-004) 114521227-114654964 retained_intron
ENSMUSG00000084620 (Gm25103)
predicted gene, 25103 		ENSMUST00000122671 (Gm25103-201) 114270111-114270428 misc_RNA
ENSMUSG00000084785 (Gm13972)
predicted gene 13972 		ENSMUST00000153726 (Gm13972-001) 114654425-114697839 processed_transcript
ENSMUSG00000101266 (RP23-55M21.1)
predicted gene 29234 		ENSMUST00000187452 (RP23-55M21.1-001) 114272174-114273435 lincRNA

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008IU_0001ENSG00000021776ENST00000156471ENST00000543879ENST00000558202ENST00000559090ENST00000559767ENST00000560117ENSG00000134146ENST00000256538ENST00000440392ENST00000558266ENST00000558973ENST00000559585ENST00000559784ENST00000560386ENST00000560526ENST00000561411ENSG00000198146ENST00000356321ENST00000559564ENSG00000248079ENST00000501169ENST00000559210ENST00000560866ENSG00000255192ENST00000528386ENSG00000259181ENST00000560140ENSG00000259336ENST00000559246ENSG00000259397ENST00000594613ENSG00000259411ENST00000560893ENSG00000259516ENST00000559548ENST00000560832ENSG00000259585ENST00000558517ENSG00000259587ENST00000560683ENSG00000259592ENST00000561466ENSG00000259665ENST00000558497ENSG00000259688ENST00000557918ENSG00000259710ENST00000560892ENSG00000265102ENST00000585264ENSG00000279364ENST00000623582ENSG00000280396ENST00000624413CIL_0008IU_0002ENSMUSG00000040321ENSMUST00000050668ENSMUST00000123562ENSMUSG00000040383ENSMUST00000043160ENSMUST00000102543ENSMUST00000125460ENSMUST00000126701ENSMUST00000129504ENSMUST00000131785ENSMUST00000140441ENSMUST00000147191ENSMUST00000154317ENSMUSG00000057147ENSMUST00000028640ENSMUST00000055144ENSMUST00000102542ENSMUST00000138106ENSMUST00000138975ENSMUST00000150447ENSMUSG00000084620ENSMUST00000122671ENSMUSG00000084785ENSMUST00000153726ENSMUSG00000101266ENSMUST00000187452
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008IU_0001ENSG00000021776ENST00000156471ENST00000543879ENST00000559090ENST00000559767ENSG00000134146ENST00000256538ENST00000440392ENST00000558266ENST00000559585ENST00000559784ENST00000560386ENST00000560526ENST00000561411ENSG00000198146ENST00000356321ENSG00000248079ENST00000501169ENST00000559210ENST00000560866ENSG00000255192ENST00000528386ENSG00000259181ENST00000560140ENSG00000259336ENST00000559246ENSG00000259397ENST00000594613ENSG00000259411ENST00000560893ENSG00000259516ENST00000559548ENST00000560832ENSG00000259585ENST00000558517ENSG00000259587ENST00000560683ENSG00000259592ENST00000561466ENSG00000259665ENST00000558497ENSG00000259688ENST00000557918ENSG00000259710ENST00000560892ENSG00000265102ENST00000585264ENSG00000279364ENST00000623582ENSG00000280396ENST00000624413CIL_0008IU_0002ENSMUSG00000040321ENSMUST00000050668ENSMUSG00000040383ENSMUST00000043160ENSMUST00000102543ENSMUSG00000057147ENSMUST00000028640ENSMUST00000055144ENSMUST00000102542ENSMUST00000138106ENSMUST00000150447ENSMUSG00000084620ENSMUST00000122671ENSMUSG00000084785ENSMUST00000153726ENSMUSG00000101266ENSMUST00000187452
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000021776 ENST00000156471 1.350±0.00 1.721±0.00 1.544±0.00 2.004±0.08 1.646±0.13 1.787±0.00 0.811±0.14 2.877±0.00 1.719±0.88 1.826±1.25 1.128±0.00 2.416±1.25 1.398±0.22 1.950±0.49
ENST00000543879 3.049±0.00 1.946±0.00 2.142±0.00 N/A 2.316±0.74 0.710±0.00 1.218±0.02 1.811±0.83 2.795±2.03 1.679±0.00 0.547±0.04 1.262±0.21 2.950±0.56 3.789±0.00
ENST00000558202 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559090 N/A 1.333±0.00 N/A N/A N/A 1.517±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559767 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.017±0.00 N/A N/A
ENST00000560117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000134146 ENST00000256538 0.977±0.00 1.041±0.00 N/A 0.279±0.00 0.612±0.00 1.106±0.12 1.110±0.45 0.900±0.62 0.196±0.00 0.860±0.00 0.382±0.11 1.841±0.89 1.165±0.26 1.172±0.71
ENST00000440392 N/A 0.163±0.00 N/A N/A 0.133±0.00 0.660±0.00 0.370±0.00 N/A 0.070±0.00 0.377±0.00 N/A N/A 0.118±0.00 N/A
ENST00000558266 N/A N/A N/A N/A N/A N/A N/A 1.651±0.87 0.765±0.00 1.518±0.00 2.099±0.00 N/A 1.220±0.28 N/A
ENST00000558973 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559585 N/A N/A N/A 2.900±0.00 N/A N/A N/A N/A N/A N/A 2.038±0.00 N/A N/A 0.940±0.00
ENST00000559784 4.017±0.00 N/A N/A N/A N/A N/A N/A N/A 1.197±0.00 N/A N/A 0.672±0.00 0.760±0.00 N/A
ENST00000560386 N/A 0.233±0.00 N/A 0.226±0.05 0.449±0.00 0.164±0.00 N/A 0.194±0.02 N/A 0.924±0.00 N/A N/A N/A 0.208±0.00
ENST00000560526 N/A N/A N/A N/A N/A 2.921±0.00 4.356±0.00 0.601±0.00 3.118±0.00 N/A 1.390±0.00 N/A N/A N/A
ENST00000561411 2.592±0.00 1.241±0.00 3.347±0.00 2.601±0.29 2.723±0.00 5.916±0.00 3.016±0.00 1.773±0.65 N/A 3.889±0.00 1.360±0.00 7.256±4.61 1.948±0.85 2.437±1.07
ENSG00000198146 ENST00000356321 N/A N/A 3.237±0.00 0.963±0.00 0.678±0.00 1.050±0.00 0.821±0.00 2.476±0.00 1.508±0.00 3.098±1.68 N/A 1.832±0.15 1.917±0.51 2.361±0.00
ENST00000559564 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000248079 ENST00000501169 0.031±0.00 0.053±0.00 0.410±0.00 0.314±0.05 N/A 0.032±0.01 0.417±0.00 0.402±0.00 0.049±0.00 0.130±0.09 N/A 0.192±0.10 0.095±0.07 0.048±0.01
ENST00000559210 N/A N/A N/A N/A N/A 0.335±0.00 0.476±0.00 N/A N/A 0.360±0.00 0.024±0.00 0.513±0.00 N/A N/A
ENST00000560866 N/A N/A 1.577±0.00 0.632±0.03 N/A N/A N/A N/A 0.138±0.00 N/A N/A 0.397±0.00 N/A 0.144±0.03
ENSG00000255192 ENST00000528386 N/A N/A 0.107±0.00 N/A 0.278±0.00 N/A 0.098±0.00 0.069±0.00 0.152±0.00 N/A N/A 0.382±0.00 0.041±0.00 0.316±0.00
ENSG00000259181 ENST00000560140 N/A N/A N/A N/A 0.195±0.00 N/A 0.179±0.00 0.074±0.00 N/A N/A N/A 0.088±0.00 N/A 0.298±0.00
ENSG00000259336 ENST00000559246 N/A 0.051±0.00 1.004±0.00 0.064±0.03 0.034±0.00 0.446±0.00 0.021±0.00 N/A 0.249±0.00 N/A N/A 0.179±0.21 N/A 0.322±0.19
ENSG00000259397 ENST00000594613 0.027±0.00 0.086±0.00 0.865±0.00 0.080±0.05 0.502±0.00 0.027±0.00 0.109±0.03 N/A 0.624±0.00 0.225±0.00 0.026±0.00 0.065±0.00 0.128±0.03 0.484±0.08
ENSG00000259411 ENST00000560893 N/A 0.013±0.00 0.132±0.00 0.124±0.00 0.094±0.07 0.139±0.11 0.059±0.02 0.013±0.00 0.188±0.00 0.076±0.05 0.012±0.00 0.027±0.00 N/A 0.012±0.00
ENSG00000259516 ENST00000559548 N/A N/A 0.058±0.00 0.069±0.00 N/A 0.063±0.00 0.063±0.00 N/A 0.021±0.00 N/A N/A N/A N/A 0.054±0.00
ENST00000560832 0.098±0.00 0.075±0.00 N/A N/A 0.076±0.00 N/A N/A 0.078±0.00 0.058±0.00 0.015±0.00 N/A 0.040±0.00 0.036±0.01 N/A
ENSG00000259585 ENST00000558517 N/A 0.143±0.00 0.431±0.00 0.133±0.00 0.064±0.01 0.218±0.00 0.035±0.02 0.013±0.00 0.257±0.00 0.230±0.00 N/A 0.271±0.15 N/A 1.137±0.00
ENSG00000259587 ENST00000560683 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.107±0.00 0.146±0.02 1.030±0.63
ENSG00000259592 ENST00000561466 0.087±0.00 0.608±0.00 N/A 0.390±0.23 0.102±0.00 0.648±0.56 0.057±0.01 0.301±0.00 0.229±0.05 0.362±0.31 0.398±0.36 0.339±0.17 0.126±0.03 0.344±0.00
ENSG00000259665 ENST00000558497 N/A 0.155±0.00 N/A 0.031±0.00 0.058±0.00 N/A 0.029±0.00 N/A N/A N/A N/A N/A N/A 0.252±0.00
ENSG00000259688 ENST00000557918 N/A N/A 1.247±0.00 N/A 0.261±0.00 N/A N/A N/A N/A N/A N/A 1.579±0.00 N/A N/A
ENSG00000259710 ENST00000560892 0.077±0.00 N/A 0.219±0.00 0.466±0.00 0.523±0.00 0.111±0.00 0.312±0.00 0.717±0.00 0.070±0.00 N/A N/A 0.640±0.20 N/A N/A
ENSG00000265102 ENST00000585264 N/A N/A N/A 0.188±0.00 N/A N/A N/A 0.921±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000279364 ENST00000623582 N/A 10.150±0.00 3.229±0.00 11.449±0.00 N/A 3.950±0.00 2.108±0.00 12.630±7.69 N/A 5.088±0.00 1.242±0.00 10.221±4.93 5.885±0.00 12.663±5.72
ENSG00000280396 ENST00000624413 0.074±0.00 0.244±0.00 1.538±0.00 0.038±0.00 0.167±0.00 0.030±0.00 0.131±0.00 0.202±0.00 0.030±0.00 0.198±0.00 N/A N/A N/A 0.067±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000040321 ENSMUST00000050668 1.769±0.48 0.728±0.13 2.723±0.03 3.116±0.34 1.361±0.32 0.737±0.17 2.748±0.42 1.306±0.21 1.553±0.79 1.519±0.14 4.211±0.52 1.541±0.82 1.554±0.40 1.156±0.27
ENSMUST00000123562 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000040383 ENSMUST00000043160 9.643±2.58 16.511±1.90 7.214±0.80 10.990±5.47 11.426±2.99 10.474±1.42 4.123±0.97 8.598±1.70 7.550±3.63 12.215±0.72 2.504±0.48 14.336±4.07 8.003±2.83 6.068±2.65
ENSMUST00000102543 N/A N/A N/A N/A N/A N/A 0.893±0.14 N/A N/A N/A 0.437±0.02 4.332±1.66 6.713±0.00 1.422±0.00
ENSMUST00000125460 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126701 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129504 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131785 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140441 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147191 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154317 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000057147 ENSMUST00000028640 1.781±0.60 8.450±3.18 N/A 1.052±0.00 2.325±0.60 1.690±0.56 0.985±0.34 2.275±1.05 1.142±0.41 2.905±0.42 0.298±0.05 7.679±3.66 1.930±0.11 0.583±0.06
ENSMUST00000055144 2.133±0.00 6.769±1.88 N/A 0.190±0.00 2.088±0.05 0.646±0.00 0.624±0.00 1.526±0.29 N/A 1.999±0.05 0.181±0.00 5.723±2.11 2.588±0.00 0.221±0.00
ENSMUST00000102542 2.673±1.27 3.947±0.86 4.925±0.32 2.321±1.07 1.326±0.38 1.542±0.68 0.793±0.00 2.047±0.52 3.060±1.47 3.031±1.30 0.957±0.26 3.793±1.02 4.044±2.30 2.295±1.08
ENSMUST00000138106 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.744±0.00
ENSMUST00000138975 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150447 N/A N/A 1.093±0.06 0.589±0.39 N/A N/A 0.516±0.09 N/A 0.818±0.30 N/A 0.339±0.07 1.418±0.63 N/A 0.590±0.41
ENSMUSG00000084620 ENSMUST00000122671 N/A N/A N/A 0.099±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000084785 ENSMUST00000153726 N/A N/A 0.002±0.00 0.003±0.00 N/A N/A N/A 0.015±0.00 0.002±0.00 N/A N/A 0.005±0.00 0.002±0.00 N/A
ENSMUSG00000101266 ENSMUST00000187452 N/A N/A N/A 0.025±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Loading