C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: desmocollin 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000360428 DSC3-001 ENSG00000134762 9606 - 18:30990008-31042741 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyMuscleOvaryPlacentaTestisENST00000360428
Transcript ID Brain Breast Colon Heart Kidney Muscle Ovary Placenta Testis
ENST00000360428 0.015±0.00 0.966±0.22 0.253±0.00 0.057±0.04 0.046±0.00 0.003±0.00 0.893±0.56 3.930±1.19 0.121±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006EO CIL_0006EO_0001 CGP 18:27950966-31042815
CIL_0006EN CIL_0006EN_0001 CGP 18:30990008-31102415

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001701 IEA in utero embryonic development
GO:0005509 IEA calcium ion binding
GO:0005576 IEA extracellular region
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0005911 TAS cell-cell junction
GO:0007155 TAS cell adhesion
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 TAS:IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030057 IEA desmosome
GO:0045295 IPI gamma-catenin binding
GO:0050821 IDA protein stabilization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.00000002 68

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