C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 71, member F1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000135248 FAM71F1 9606 + 7:128709061-128731743 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000315184 FAM71F1-002 128715389-128731743 protein_coding
  ENST00000466842 FAM71F1-008 128718829-128726854 protein_coding
  ENST00000469348 FAM71F1-005 128709090-128724967 processed_transcript
  ENST00000471558 FAM71F1-006 128715389-128726868 nonsense_mediated_decay
  ENST00000483459 FAM71F1-007 128715405-128719082 processed_transcript
  ENST00000484425 FAM71F1-003 128709075-128731623 nonsense_mediated_decay
  ENST00000485070 FAM71F1-001 128709061-128731611 protein_coding
  ENST00000493738 FAM71F1-004 128709090-128723426 retained_intron
  ENST00000621392 FAM71F1-201 128713891-128731743 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonKidneyOvaryPlacentaTestisENST00000466842ENST00000485070ENST00000493738ENST00000621392
Transcript ID Brain Colon Kidney Ovary Placenta Testis
ENST00000466842 N/A N/A 0.222±0.00 N/A N/A N/A
ENST00000485070 N/A 0.069±0.00 0.155±0.00 0.045±0.00 0.028±0.00 11.292±2.29
ENST00000493738 N/A N/A 0.064±0.00 N/A N/A N/A
ENST00000621392 0.111±0.01 N/A N/A 0.103±0.00 N/A 10.823±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004F7 CIL_0004F7_0001 CGP 7:128672288-128731743
CIL_0004FD CIL_0004FD_0001 CGP 7:128709061-128771807

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000039742 Fam71f1 family with sequence similarity 71, member F1 protein_coding Mus_musculus

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