C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004FD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000135248-ENSG00000128595 CGP 9606 7:128709061-128771807
GeneTranscriptPositionBiotype
ENSG00000128595 (CALU)
calumenin 		ENST00000249364 (CALU-001) 128739342-128771474 protein_coding
ENST00000449187 (CALU-002) 128739363-128770576 protein_coding
ENST00000479257 (CALU-003) 128739404-128769936 protein_coding
ENST00000493278 (CALU-004) 128758962-128771807 protein_coding
ENST00000535011 (CALU-006) 128739292-128771477 protein_coding
ENST00000542996 (CALU-005) 128739292-128771477 protein_coding
ENSG00000244218 (RN7SL81P)
RNA, 7SL, cytoplasmic 81, pseudogene 		ENST00000493781 (RN7SL81P-201) 128761338-128761598 misc_RNA
CIL_0004FD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039742-ENSMUSG00000029767 CGP 10090 6:29319140-29377110
GeneTranscriptPositionBiotype
ENSMUSG00000029767 (Calu)
calumenin 		ENSMUST00000031779 (Calu-001) 29348106-29376675 protein_coding
ENSMUST00000090481 (Calu-002) 29348119-29376129 protein_coding
ENSMUST00000138523 (Calu-004) 29373666-29375031 processed_transcript
ENSMUST00000156163 (Calu-003) 29361461-29373352 protein_coding
ENSMUST00000172607 (Calu-010) 29372553-29377110 protein_coding
ENSMUST00000172974 (Calu-009) 29356477-29374503 protein_coding
ENSMUST00000173216 (Calu-007) 29348069-29374503 protein_coding
ENSMUST00000173694 (Calu-008) 29356477-29374503 protein_coding
ENSMUST00000174096 (Calu-005) 29356477-29374503 nonsense_mediated_decay
ENSMUST00000174280 (Calu-006) 29361224-29372551 protein_coding
ENSMUSG00000039742 (Fam71f1)
family with sequence similarity 71, member F1 		ENSMUST00000090487 (Fam71f1-001) 29319140-29336019 protein_coding
ENSMUST00000163229 (Fam71f1-004) 29319157-29335854 nonsense_mediated_decay
ENSMUST00000164560 (Fam71f1-003) 29319157-29335854 protein_coding
ENSMUST00000166462 (Fam71f1-002) 29319199-29335854 protein_coding
ENSMUST00000168771 (Fam71f1-005) 29319140-29326726 processed_transcript
ENSMUSG00000090692 (Gm17172)
predicted gene 17172 		ENSMUST00000171782 (Gm17172-001) 29322804-29323206 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004FD_0001ENSG00000128595ENST00000249364ENST00000449187ENST00000479257ENST00000493278ENST00000535011ENST00000542996ENSG00000244218ENST00000493781CIL_0004FD_0002ENSMUSG00000029767ENSMUST00000031779ENSMUST00000090481ENSMUST00000138523ENSMUST00000156163ENSMUST00000172607ENSMUST00000172974ENSMUST00000173216ENSMUST00000173694ENSMUST00000174096ENSMUST00000174280ENSMUSG00000039742ENSMUST00000090487ENSMUST00000163229ENSMUST00000164560ENSMUST00000166462ENSMUST00000168771ENSMUSG00000090692ENSMUST00000171782
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004FD_0001ENSG00000128595ENST00000249364ENST00000449187ENST00000479257ENST00000493278ENST00000535011ENSG00000244218ENST00000493781CIL_0004FD_0002ENSMUSG00000029767ENSMUST00000031779ENSMUST00000090481ENSMUST00000172974ENSMUST00000173216ENSMUST00000174096ENSMUSG00000039742ENSMUST00000090487ENSMUST00000163229ENSMUST00000164560ENSMUST00000166462ENSMUST00000168771ENSMUSG00000090692ENSMUST00000171782
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000128595 ENST00000249364 36.229±0.00 26.100±0.00 3.081±0.00 7.440±2.82 23.397±6.95 25.954±17.29 38.595±28.24 14.219±10.78 18.427±3.45 22.107±13.26 9.480±6.39 31.810±9.86 64.336±22.62 19.017±16.23
ENST00000449187 13.500±0.00 8.295±0.00 0.834±0.00 4.408±0.00 7.887±0.53 5.918±2.33 4.549±0.00 6.576±0.00 9.032±5.30 5.346±1.56 4.357±0.00 12.121±6.22 43.870±0.00 7.627±1.06
ENST00000479257 N/A N/A N/A N/A 5.837±0.00 N/A N/A N/A N/A 2.711±0.00 N/A N/A N/A N/A
ENST00000493278 N/A N/A 3.756±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535011 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.395±0.00 N/A N/A N/A
ENST00000542996 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000244218 ENST00000493781 0.327±0.00 1.738±0.00 N/A 0.521±0.00 0.216±0.00 1.811±0.00 0.066±0.00 N/A 2.554±0.00 0.070±0.00 0.883±0.00 0.863±0.22 N/A 0.244±0.05
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029767 ENSMUST00000031779 43.070±16.41 5.141±1.49 88.158±7.22 25.219±14.66 21.941±12.06 11.010±2.13 33.083±3.98 14.071±1.98 25.390±17.60 35.972±11.25 9.168±3.08 32.553±13.51 89.362±41.88 4.867±0.91
ENSMUST00000090481 N/A N/A 24.559±0.00 7.928±0.00 N/A N/A N/A N/A 8.474±0.14 N/A 10.154±1.10 22.287±1.98 53.545±23.60 2.466±0.80
ENSMUST00000138523 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156163 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172607 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172974 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 140.510±0.00 N/A 25.326±0.00
ENSMUST00000173216 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 190.825±0.00 N/A 54.427±0.00
ENSMUST00000173694 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174096 N/A N/A N/A 49.135±0.00 N/A N/A N/A N/A N/A N/A N/A 188.839±0.00 422.153±76.16 38.008±0.00
ENSMUST00000174280 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000039742 ENSMUST00000090487 N/A N/A N/A 0.009±0.00 N/A N/A N/A 0.028±0.01 0.008±0.00 N/A N/A N/A 0.114±0.06 44.189±9.36
ENSMUST00000163229 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 34.598±1.68
ENSMUST00000164560 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.289±0.00 30.617±5.31
ENSMUST00000166462 N/A N/A N/A N/A 0.060±0.00 0.041±0.00 0.040±0.02 0.043±0.02 0.008±0.00 0.048±0.02 0.035±0.00 N/A 0.127±0.13 56.884±6.45
ENSMUST00000168771 0.048±0.00 N/A 0.013±0.00 N/A N/A N/A 0.133±0.00 N/A N/A 0.057±0.00 N/A N/A N/A N/A
ENSMUSG00000090692 ENSMUST00000171782 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.936±0.86

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