C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transcription factor CP2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000135457 TFCP2 9606 - 12:51093663-51173134 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000257915 TFCP2-001 51093663-51172881 protein_coding
  ENST00000546822 TFCP2-007 51095158-51103931 retained_intron
  ENST00000548108 TFCP2-005 51096023-51172793 protein_coding
  ENST00000548115 TFCP2-004 51095222-51172912 protein_coding
  ENST00000549867 TFCP2-002 51094883-51173134 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000257915ENST00000548108ENST00000548115ENST00000549867
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000257915 1.954±0.00 1.948±0.00 0.826±0.00 0.977±0.00 1.252±0.27 2.374±0.00 1.058±0.00 3.879±0.00 0.219±0.00 0.847±0.03 N/A 4.607±2.62 2.903±0.44 1.049±0.12
ENST00000548108 N/A N/A 3.322±0.00 N/A 1.171±0.00 2.774±0.00 0.429±0.00 0.395±0.00 0.952±0.43 N/A 1.638±0.00 N/A N/A N/A
ENST00000548115 2.620±0.00 2.675±0.00 N/A 3.438±0.00 4.589±0.00 4.123±0.00 1.720±1.46 1.763±0.00 N/A N/A 3.653±0.00 5.389±0.00 N/A 3.457±0.00
ENST00000549867 1.734±0.00 N/A N/A N/A N/A 3.847±0.00 2.618±0.00 4.809±0.00 0.731±0.00 2.568±0.00 2.487±0.00 3.234±0.00 2.400±0.20 2.481±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033J CIL_00033J_0002 CGP 12:51061205-51173134
CIL_00033K CIL_00033K_0002 CGP 12:51093663-51217693

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060306 tfcp2 transcription factor CP2 protein_coding Danio_rerio
ENSMUSG00000009733 Tfcp2 transcription factor CP2 protein_coding Mus_musculus

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