C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcription factor CP2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000257915 TFCP2-001 ENSG00000135457 9606 - 12:51093663-51172881 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000257915
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000257915 1.954±0.00 1.948±0.00 0.826±0.00 0.977±0.00 1.252±0.27 2.374±0.00 1.058±0.00 3.879±0.00 0.219±0.00 0.847±0.03 4.607±2.62 2.903±0.44 1.049±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033J CIL_00033J_0002 CGP 12:51061205-51173134
CIL_00033K CIL_00033K_0002 CGP 12:51093663-51217693

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000009877 Tfcp2-201 protein_coding Mus_musculus 0 1855
ENSDART00000084848 tfcp2-201 protein_coding Danio_rerio 0 797
ENSDART00000138416 tfcp2-001 protein_coding Danio_rerio 0 797

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