C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00033J_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000075972-ENSDARG00000060306 CGP 7955 23:33839542-33893936
GeneTranscriptPositionBiotype
ENSDARG00000060306 (tfcp2)
transcription factor CP2 		ENSDART00000084848 (tfcp2-201) 33870683-33893157 protein_coding
ENSDART00000138416 (tfcp2-001) 33870676-33893936 protein_coding
ENSDART00000140107 (tfcp2-002) 33871678-33880575 retained_intron
ENSDARG00000075972 (csrnp2)
cysteine-serine-rich nuclear protein 2 		ENSDART00000114308 (csrnp2-201) 33839542-33854630 protein_coding
ENSDART00000146180 (csrnp2-001) 33846912-33868560 protein_coding
CIL_00033J_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000110925-ENSG00000135457 CGP 9606 12:51061205-51173134
GeneTranscriptPositionBiotype
ENSG00000110925 (CSRNP2)
cysteine-serine-rich nuclear protein 2 		ENST00000228515 (CSRNP2-001) 51061205-51083550 protein_coding
ENST00000546935 (CSRNP2-004) 51074058-51083583 protein_coding
ENST00000548206 (CSRNP2-006) 51067899-51083582 protein_coding
ENST00000548981 (CSRNP2-003) 51073890-51083643 protein_coding
ENST00000550461 (CSRNP2-005) 51076569-51083596 processed_transcript
ENST00000550533 (CSRNP2-008) 51073928-51076835 retained_intron
ENST00000552680 (CSRNP2-002) 51076416-51083664 processed_transcript
ENST00000552899 (CSRNP2-007) 51073975-51083110 protein_coding
ENSG00000135457 (TFCP2)
transcription factor CP2 		ENST00000257915 (TFCP2-001) 51093663-51172881 protein_coding
ENST00000546822 (TFCP2-007) 51095158-51103931 retained_intron
ENST00000548108 (TFCP2-005) 51096023-51172793 protein_coding
ENST00000548115 (TFCP2-004) 51095222-51172912 protein_coding
ENST00000549867 (TFCP2-002) 51094883-51173134 protein_coding
ENSG00000200953 (Y_RNA)
Y RNA 		ENST00000364083 (Y_RNA.1-403) 51156868-51156977 misc_RNA
ENSG00000244540 (RP11-416A17.1)
 ENST00000469738 (RP11-416A17.1-001) 51106817-51107144 processed_pseudogene
ENSG00000257246 (RP11-416A17.6)
 ENST00000547512 (RP11-416A17.6-001) 51124628-51125381 processed_pseudogene
CIL_00033J_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000044636-ENSMUSG00000009733 CGP 10090 15:100479570-100552008
GeneTranscriptPositionBiotype
ENSMUSG00000009733 (Tfcp2)
transcription factor CP2 		ENSMUST00000009877 (Tfcp2-201) 100502799-100552008 protein_coding
ENSMUSG00000044636 (Csrnp2)
cysteine-serine-rich nuclear protein 2 		ENSMUST00000061457 (Csrnp2-201) 100479570-100495239 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00033J_0001ENSDARG00000060306ENSDART00000084848ENSDART00000138416ENSDART00000140107ENSDARG00000075972ENSDART00000114308ENSDART00000146180CIL_00033J_0002ENSG00000110925ENST00000228515ENST00000546935ENST00000548206ENST00000548981ENST00000550461ENST00000550533ENST00000552680ENST00000552899ENSG00000135457ENST00000257915ENST00000546822ENST00000548108ENST00000548115ENST00000549867ENSG00000200953ENST00000364083ENSG00000244540ENST00000469738ENSG00000257246ENST00000547512CIL_00033J_0003ENSMUSG00000009733ENSMUST00000009877ENSMUSG00000044636ENSMUST00000061457
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00033J_0001ENSDARG00000060306ENSDART00000084848ENSDART00000138416ENSDARG00000075972ENSDART00000114308CIL_00033J_0002ENSG00000110925ENST00000228515ENST00000548206ENSG00000135457ENST00000257915ENST00000548108ENST00000548115ENST00000549867ENSG00000200953ENST00000364083ENSG00000244540ENST00000469738ENSG00000257246ENST00000547512CIL_00033J_0003ENSMUSG00000009733ENSMUST00000009877ENSMUSG00000044636ENSMUST00000061457
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000060306 ENSDART00000084848 N/A N/A N/A 5.398±2.00 N/A N/A 1.240±0.89 N/A 2.030±0.00 N/A 3.583±0.00 N/A N/A N/A
ENSDART00000138416 N/A N/A N/A 5.237±2.30 N/A N/A 2.930±1.94 3.865±3.94 1.373±0.00 N/A 1.345±0.00 N/A N/A N/A
ENSDART00000140107 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000075972 ENSDART00000114308 N/A N/A N/A 3.695±2.29 N/A N/A 1.497±0.51 0.358±0.17 0.072±0.00 N/A 0.339±0.00 N/A N/A N/A
ENSDART00000146180 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000110925 ENST00000228515 2.751±0.00 N/A N/A 9.089±0.00 2.456±0.00 1.589±0.67 2.573±2.19 4.335±0.00 1.930±0.82 6.670±0.00 1.217±0.63 4.770±3.01 4.907±0.91 24.167±7.33
ENST00000546935 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548206 N/A N/A N/A N/A N/A N/A N/A 3.427±0.00 N/A N/A N/A N/A N/A N/A
ENST00000548981 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550461 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550533 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552680 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552899 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000135457 ENST00000257915 1.954±0.00 1.948±0.00 0.826±0.00 0.977±0.00 1.252±0.27 2.374±0.00 1.058±0.00 3.879±0.00 0.219±0.00 0.847±0.03 N/A 4.607±2.62 2.903±0.44 1.049±0.12
ENST00000546822 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548108 N/A N/A 3.322±0.00 N/A 1.171±0.00 2.774±0.00 0.429±0.00 0.395±0.00 0.952±0.43 N/A 1.638±0.00 N/A N/A N/A
ENST00000548115 2.620±0.00 2.675±0.00 N/A 3.438±0.00 4.589±0.00 4.123±0.00 1.720±1.46 1.763±0.00 N/A N/A 3.653±0.00 5.389±0.00 N/A 3.457±0.00
ENST00000549867 1.734±0.00 N/A N/A N/A N/A 3.847±0.00 2.618±0.00 4.809±0.00 0.731±0.00 2.568±0.00 2.487±0.00 3.234±0.00 2.400±0.20 2.481±0.00
ENSG00000200953 ENST00000364083 0.289±0.00 N/A N/A 0.140±0.00 2.307±0.00 69.140±0.00 N/A 0.820±0.00 0.638±0.00 N/A N/A N/A N/A 0.657±0.00
ENSG00000244540 ENST00000469738 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.153±1.02 N/A 0.083±0.00
ENSG00000257246 ENST00000547512 0.085±0.00 0.204±0.00 0.552±0.00 0.123±0.00 0.287±0.07 0.122±0.01 0.115±0.03 0.023±0.00 0.522±0.50 0.042±0.00 0.137±0.00 0.282±0.16 0.112±0.00 0.306±0.04
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000009733 ENSMUST00000009877 0.839±0.30 N/A 3.783±1.15 5.953±2.65 1.994±0.85 1.345±0.60 0.731±0.32 3.035±2.03 1.156±0.42 1.527±0.73 0.797±0.37 4.635±1.51 1.358±0.63 1.915±1.29
ENSMUSG00000044636 ENSMUST00000061457 1.894±0.75 2.849±0.22 1.643±0.59 10.552±5.69 1.965±0.50 1.400±0.39 0.798±0.33 1.003±0.24 0.624±0.16 1.674±0.38 0.815±0.16 5.090±1.97 4.274±2.19 1.296±0.66

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