C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RALBP1 associated Eps domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000135597 REPS1 9606 - 6:138903493-138988261 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000258062 REPS1-003 138904870-138988261 protein_coding
  ENST00000367663 REPS1-005 138904860-138987775 protein_coding
  ENST00000409812 REPS1-002 138904870-138987881 protein_coding
  ENST00000414243 REPS1-010 138921064-138943926 nonsense_mediated_decay
  ENST00000415951 REPS1-015 138904892-138987720 protein_coding
  ENST00000431346 REPS1-006 138920302-138944545 nonsense_mediated_decay
  ENST00000445570 REPS1-011 138904861-138988211 nonsense_mediated_decay
  ENST00000450536 REPS1-001 138903493-138988257 protein_coding
  ENST00000478483 REPS1-009 138904866-138912871 protein_coding
  ENST00000483468 REPS1-007 138904867-138988001 nonsense_mediated_decay
  ENST00000484164 REPS1-004 138904870-138916214 retained_intron
  ENST00000492787 REPS1-012 138908795-138915187 retained_intron
  ENST00000526022 REPS1-020 138907372-138908737 protein_coding
  ENST00000526244 REPS1-021 138907535-138908912 retained_intron
  ENST00000529423 REPS1-014 138911246-138914884 retained_intron
  ENST00000529597 REPS1-013 138904861-138987640 protein_coding
  ENST00000530255 REPS1-018 138912866-138929997 protein_coding
  ENST00000530370 REPS1-019 138910923-138912837 retained_intron
  ENST00000530575 REPS1-017 138934289-138945260 nonsense_mediated_decay
  ENST00000531675 REPS1-016 138947882-138987731 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000258062ENST00000367663ENST00000415951ENST00000445570ENST00000450536ENST00000478483ENST00000483468ENST00000529597ENST00000530255
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000258062 N/A 4.643±0.00 N/A 3.159±0.00 N/A N/A N/A N/A N/A N/A N/A 3.409±0.38 1.500±0.05 8.561±1.32
ENST00000367663 4.665±0.00 N/A 0.787±0.00 3.576±0.00 2.168±0.00 1.850±0.00 1.572±0.67 1.325±0.00 2.151±0.00 N/A N/A 8.249±5.41 5.191±0.50 6.356±1.86
ENST00000415951 N/A N/A N/A N/A 2.589±0.00 1.348±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000445570 2.691±0.00 N/A 0.847±0.00 4.722±0.00 2.384±0.00 1.337±0.14 2.166±1.30 3.689±0.00 5.960±0.00 2.616±0.00 3.245±0.28 2.717±0.00 1.488±0.19 6.490±0.00
ENST00000450536 N/A N/A N/A 1.494±0.12 N/A 0.463±0.00 0.848±0.14 0.827±0.00 N/A 1.181±0.00 N/A 1.349±0.44 0.626±0.00 N/A
ENST00000478483 N/A N/A N/A N/A 4.788±0.00 5.058±0.00 N/A 7.476±0.00 N/A N/A N/A N/A N/A 19.750±0.00
ENST00000483468 N/A N/A N/A 1.626±0.49 0.972±0.00 N/A N/A 1.336±0.00 N/A N/A 0.257±0.00 N/A N/A N/A
ENST00000529597 N/A 3.112±0.00 N/A N/A 2.409±0.00 1.162±0.00 2.963±0.00 2.366±0.00 4.232±2.71 N/A 3.268±0.00 2.632±0.00 2.543±0.87 N/A
ENST00000530255 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.007±0.00 45.820±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IPI:IEA protein binding
GO:0005886 IDA plasma membrane
GO:0005905 IDA coated pit
GO:0006898 IEA receptor-mediated endocytosis
GO:0017124 IPI SH3 domain binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002877 reps1 RALBP1 associated Eps domain containing 1 protein_coding Danio_rerio
ENSMUSG00000019854 Reps1 RalBP1 associated Eps domain containing protein protein_coding Mus_musculus

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