C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RALBP1 associated Eps domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000450536 REPS1-001 ENSG00000135597 9606 - 6:138903493-138988257 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartKidneyLungOvaryPlacentaENST00000450536
Transcript ID Brain Colon Heart Kidney Lung Ovary Placenta
ENST00000450536 1.494±0.12 0.463±0.00 0.848±0.14 0.827±0.00 1.181±0.00 1.349±0.44 0.626±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IPI:IEA protein binding
GO:0005886 IDA plasma membrane
GO:0005905 IDA coated pit
GO:0006898 IEA receptor-mediated endocytosis
GO:0017124 IPI SH3 domain binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000126390 Reps1-001 protein_coding Mus_musculus 0 3336
ENSMUST00000154718 Reps1-004 protein_coding Mus_musculus 0 1770
ENSMUST00000164556 Reps1-201 protein_coding Mus_musculus 0 1722
ENSMUST00000150029 Reps1-002 protein_coding Mus_musculus 0 1646
ENSMUST00000155284 Reps1-003 nonsense_mediated_decay Mus_musculus 0 1469
ENSMUST00000128711 Reps1-005 retained_intron Mus_musculus 0 1280
ENSMUST00000155892 Reps1-007 protein_coding Mus_musculus 0 966
ENSMUST00000144287 Reps1-008 retained_intron Mus_musculus 0 710
ENSMUST00000155959 Reps1-006 protein_coding Mus_musculus 0 593
ENSDART00000019744 reps1-201 protein_coding Danio_rerio 0 507
ENSDART00000132132 reps1-001 protein_coding Danio_rerio 0 507
ENSMUST00000150533 Reps1-009 retained_intron Mus_musculus 0 206

Loading