C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RALBP1 associated Eps domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000367663 REPS1-005 ENSG00000135597 9606 - 6:138904860-138987775 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENST00000367663
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENST00000367663 4.665±0.00 0.787±0.00 3.576±0.00 2.168±0.00 1.850±0.00 1.572±0.67 1.325±0.00 2.151±0.00 8.249±5.41 5.191±0.50 6.356±1.86

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IPI:IEA protein binding
GO:0005886 IDA plasma membrane
GO:0005905 IDA coated pit
GO:0006898 IEA receptor-mediated endocytosis
GO:0017124 IPI SH3 domain binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000164556 Reps1-201 protein_coding Mus_musculus 0 3192
ENSMUST00000150029 Reps1-002 protein_coding Mus_musculus 0 3114
ENSMUST00000154718 Reps1-004 protein_coding Mus_musculus 0 1980
ENSMUST00000155284 Reps1-003 nonsense_mediated_decay Mus_musculus 0 1849
ENSMUST00000126390 Reps1-001 protein_coding Mus_musculus 0 1722
ENSMUST00000128711 Reps1-005 retained_intron Mus_musculus 0 1282
ENSMUST00000144287 Reps1-008 retained_intron Mus_musculus 0 710
ENSMUST00000155959 Reps1-006 protein_coding Mus_musculus 0 593
ENSMUST00000155892 Reps1-007 protein_coding Mus_musculus 0 553
ENSMUST00000150533 Reps1-009 retained_intron Mus_musculus 0 206

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