C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RALBP1 associated Eps domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000445570 REPS1-011 ENSG00000135597 9606 - 6:138904861-138988211 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000445570
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000445570 2.691±0.00 0.847±0.00 4.722±0.00 2.384±0.00 1.337±0.14 2.166±1.30 3.689±0.00 5.960±0.00 2.616±0.00 3.245±0.28 2.717±0.00 1.488±0.19 6.490±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0006898 IEA receptor-mediated endocytosis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000155284 Reps1-003 nonsense_mediated_decay Mus_musculus 0 2713
ENSMUST00000164556 Reps1-201 protein_coding Mus_musculus 0 1851
ENSMUST00000150029 Reps1-002 protein_coding Mus_musculus 0 1851
ENSMUST00000126390 Reps1-001 protein_coding Mus_musculus 0 1465
ENSMUST00000154718 Reps1-004 protein_coding Mus_musculus 0 998
ENSMUST00000144287 Reps1-008 retained_intron Mus_musculus 0 710
ENSMUST00000128711 Reps1-005 retained_intron Mus_musculus 0 387
ENSMUST00000155892 Reps1-007 protein_coding Mus_musculus 0 383
ENSMUST00000155959 Reps1-006 protein_coding Mus_musculus 0 259
ENSMUST00000150533 Reps1-009 retained_intron Mus_musculus 0 206

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