C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chaperonin containing TCP1, subunit 7 (eta)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000135624 CCT7 9606 + 2:73233420-73253021 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000258091 CCT7-001 73234238-73253004 protein_coding
  ENST00000398422 CCT7-010 73234308-73253004 protein_coding
  ENST00000399032 CCT7-003 73234308-73244029 protein_coding
  ENST00000409924 CCT7-015 73234309-73247789 nonsense_mediated_decay
  ENST00000461290 CCT7-011 73234269-73244511 retained_intron
  ENST00000464397 CCT7-009 73234307-73240147 retained_intron
  ENST00000469844 CCT7-004 73233429-73244630 processed_transcript
  ENST00000471927 CCT7-007 73233420-73243108 processed_transcript
  ENST00000473197 CCT7-006 73233445-73240548 processed_transcript
  ENST00000473786 CCT7-013 73234336-73249844 processed_transcript
  ENST00000480489 CCT7-012 73234309-73243193 retained_intron
  ENST00000482064 CCT7-008 73239101-73243130 processed_transcript
  ENST00000488856 CCT7-016 73243846-73249061 retained_intron
  ENST00000492253 CCT7-005 73233459-73243082 processed_transcript
  ENST00000539919 CCT7-201 73234236-73253021 protein_coding
  ENST00000540468 CCT7-202 73234236-73253021 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000258091ENST00000398422ENST00000409924ENST00000461290ENST00000469844ENST00000473786ENST00000540468
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000258091 58.304±0.00 54.380±0.00 1.659±0.00 41.530±13.61 30.108±13.85 46.922±33.33 34.563±27.01 38.715±24.76 14.803±4.32 35.204±27.98 44.528±28.47 71.186±28.16 64.832±39.93 64.958±16.33
ENST00000398422 19.911±0.00 40.981±0.00 N/A 20.427±0.00 20.805±0.00 29.771±0.00 N/A 30.302±0.00 N/A N/A N/A 81.226±68.88 64.946±0.00 101.303±42.50
ENST00000409924 N/A N/A N/A N/A N/A N/A 6.989±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000461290 N/A N/A 2.417±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469844 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 222.466±0.00 99.218±0.00 224.430±0.00
ENST00000473786 N/A N/A 2.981±0.00 12.512±0.00 N/A 11.984±0.00 7.941±0.00 N/A 17.378±0.00 N/A N/A 16.164±0.00 N/A N/A
ENST00000540468 N/A 21.803±0.00 N/A N/A 11.815±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008RW CIL_0008RW_0001 VISTA 2:72647671-73248640
CIL_0003EL CIL_0003EL_0001 CGP 2:73228006-73253021
CIL_0003EI CIL_0003EI_0001 CGP 2:73233420-73284431

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002199 IEA zona pellucida receptor complex
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005737 TAS cytoplasm
GO:0005739 IEA mitochondrion
GO:0005829 TAS cytosol
GO:0005832 IEA chaperonin-containing T-complex
GO:0005874 IDA microtubule
GO:0006457 IEA:TAS protein folding
GO:0007339 IEA binding of sperm to zona pellucida
GO:0042802 IEA identical protein binding
GO:0044267 TAS:IEA cellular protein metabolic process
GO:0044297 IEA cell body
GO:0051082 IEA unfolded protein binding
GO:0051084 TAS 'de novo' posttranslational protein folding
GO:0070062 IDA extracellular vesicular exosome
GO:1901998 IEA toxin transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007385 cct7 chaperonin containing TCP1, subunit 7 (eta) protein_coding Danio_rerio
ENSMUSG00000030007 Cct7 chaperonin containing Tcp1, subunit 7 (eta) protein_coding Mus_musculus

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