C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: dynein, cytoplasmic 1, light intermediate chain 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000135720 DYNC1LI2 9606 - 16:66720893-66751798 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000258198 DYNC1LI2-001 66720893-66751798 protein_coding
  ENST00000440564 DYNC1LI2-004 66732009-66751594 protein_coding
  ENST00000443351 DYNC1LI2-003 66723478-66751601 protein_coding
  ENST00000561727 DYNC1LI2-010 66733973-66736237 retained_intron
  ENST00000563628 DYNC1LI2-016 66723570-66729099 protein_coding
  ENST00000564090 DYNC1LI2-011 66742451-66751601 nonsense_mediated_decay
  ENST00000564559 DYNC1LI2-008 66723601-66728219 nonsense_mediated_decay
  ENST00000564833 DYNC1LI2-006 66725849-66732637 retained_intron
  ENST00000565532 DYNC1LI2-015 66727997-66736197 retained_intron
  ENST00000566150 DYNC1LI2-013 66736102-66751601 protein_coding
  ENST00000567499 DYNC1LI2-002 66723601-66733546 retained_intron
  ENST00000568180 DYNC1LI2-012 66736168-66751601 nonsense_mediated_decay
  ENST00000568453 DYNC1LI2-007 66723606-66730348 retained_intron
  ENST00000569320 DYNC1LI2-014 66723585-66730219 protein_coding
  ENST00000570201 DYNC1LI2-009 66729040-66731034 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000258198ENST00000440564ENST00000443351ENST00000567499
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000258198 9.442±0.00 15.666±0.00 N/A 10.179±0.00 3.376±0.00 1.947±0.00 22.726±0.00 9.886±0.00 3.001±0.00 4.901±2.21 9.877±0.08 16.439±0.00
ENST00000440564 N/A N/A N/A N/A N/A N/A N/A N/A 7.064±0.00 N/A N/A N/A
ENST00000443351 N/A N/A N/A 10.217±0.00 N/A N/A N/A 6.555±0.00 N/A N/A N/A N/A
ENST00000567499 N/A N/A 5.633±0.00 3.817±0.00 N/A 0.934±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WN CIL_0007WN_0001 VISTA 16:66603173-67205657
CIL_0003LZ CIL_0003LZ_0002 CGP 16:66614750-66751798
CIL_0004IU CIL_0004IU_0001 CGP 16:66720893-66801620

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000226 IEA microtubule cytoskeleton organization
GO:0003777 IEA microtubule motor activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005813 IDA centrosome
GO:0005829 TAS cytosol
GO:0005868 IEA cytoplasmic dynein complex
GO:0005874 IEA microtubule
GO:0006810 IEA transport
GO:0007018 IEA microtubule-based movement
GO:0008152 IEA metabolic process
GO:0016020 IDA membrane
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0051642 IEA centrosome localization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000035924 dync1li2 dynein, cytoplasmic 1, light intermediate chain 2 protein_coding Danio_rerio
ENSMUSG00000035770 Dync1li2 dynein, cytoplasmic 1 light intermediate chain 2 protein_coding Mus_musculus

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