C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calpain 9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000135773 CAPN9 9606 + 1:230747384-230802003 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000271971 CAPN9-001 230747384-230801772 protein_coding
  ENST00000354537 CAPN9-002 230747415-230802003 protein_coding
  ENST00000366666 CAPN9-201 230747384-230801772 protein_coding
  ENST00000480004 CAPN9-003 230791877-230801762 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverLungOvaryENST00000271971ENST00000354537
Transcript ID Liver Lung Ovary
ENST00000271971 0.289±0.00 2.425±0.00 0.247±0.00
ENST00000354537 N/A 0.417±0.00 0.076±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WK CIL_0007WK_0001 VISTA 1:230548777-231152235
CIL_000615 CIL_000615_0001 CGP 1:230702523-230802003
CIL_000616 CIL_000616_0001 CGP 1:230747384-230869589

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004198 IBA:IEA calcium-dependent cysteine-type endopeptidase activity
GO:0005509 IEA calcium ion binding
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0005737 IBA cytoplasm
GO:0006508 IBA:IEA proteolysis
GO:0007586 IEA digestion

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000012341 capn9 calpain 9 protein_coding Danio_rerio
ENSMUSG00000031981 Capn9 calpain 9 protein_coding Mus_musculus

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