C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calpain 9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031981 Capn9 10090 + 8:124576111-124618731 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000093033 Capn9-001 124576111-124618731 protein_coding
  ENSMUST00000133086 Capn9-002 124576113-124591725 protein_coding
  ENSMUST00000133583 Capn9-003 124613440-124614626 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000093033ENSMUST00000133086ENSMUST00000133583
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000093033 0.119±0.04 0.099±0.07 0.014±0.01 0.017±0.00 0.050±0.01 14.917±3.54 0.032±0.01 0.023±0.01 0.009±0.00 0.100±0.03 0.023±0.00 0.116±0.06 0.040±0.02 0.240±0.13
ENSMUST00000133086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.129±0.00 N/A N/A
ENSMUST00000133583 N/A N/A N/A 0.308±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.453±0.04 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008A0 CIL_0008A0_0002 VISTA 8:123980149-124582109
CIL_0007WK CIL_0007WK_0002 VISTA 8:124343702-124945898
CIL_000615 CIL_000615_0002 CGP 8:124556534-124618731
CIL_000616 CIL_000616_0002 CGP 8:124576111-124663369

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004198 IBA calcium-dependent cysteine-type endopeptidase activity
GO:0005509 IEA calcium ion binding
GO:0005737 IBA cytoplasm
GO:0006508 IBA proteolysis
GO:0007586 IEA digestion

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000012341 capn9 calpain 9 protein_coding Danio_rerio
ENSG00000135773 CAPN9 calpain 9 protein_coding Homo_sapiens

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