C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phosphatidylinositol glycan anchor biosynthesis, class C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000135845 PIGC 9606 - 1:172370189-172444086 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000344529 PIGC-001 172441457-172444060 protein_coding
  ENST00000367728 PIGC-004 172441457-172444086 protein_coding
  ENST00000465374 PIGC-005 172376131-172380906 processed_transcript
  ENST00000475059 PIGC-007 172380921-172415376 processed_transcript
  ENST00000478184 PIGC-008 172442331-172443946 processed_transcript
  ENST00000484368 PIGC-002 172393134-172444083 processed_transcript
  ENST00000489002 PIGC-006 172370189-172415326 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000344529ENST00000367728ENST00000478184ENST00000484368
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000344529 5.950±0.00 10.449±0.00 1.682±0.00 4.471±0.45 5.315±1.29 5.560±2.49 1.894±1.32 8.345±0.00 3.951±0.15 3.051±0.86 2.410±0.64 11.495±5.08 15.918±3.40 11.508±2.63
ENST00000367728 N/A N/A N/A N/A N/A 0.484±0.00 0.271±0.00 0.279±0.00 N/A N/A N/A 0.905±0.00 N/A N/A
ENST00000478184 N/A N/A N/A N/A 2.227±0.00 N/A N/A 0.301±0.00 N/A N/A N/A 8.068±0.00 9.253±0.00 8.948±0.00
ENST00000484368 0.753±0.00 1.700±0.00 0.482±0.00 1.132±0.00 0.675±0.00 1.799±0.00 2.009±0.00 N/A 0.339±0.00 0.817±0.21 0.743±0.00 0.722±0.38 N/A 1.155±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007X6 CIL_0007X6_0001 VISTA 1:172021746-172625129

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000506 IDA glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex
GO:0003824 TAS catalytic activity
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006501 TAS C-terminal protein lipidation
GO:0006506 TAS:IEA GPI anchor biosynthetic process
GO:0016021 IEA integral component of membrane
GO:0016254 TAS preassembly of GPI anchor in ER membrane
GO:0017176 IEA phosphatidylinositol N-acetylglucosaminyltransferase activity
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000009113 pigc phosphatidylinositol glycan, class C protein_coding Danio_rerio
ENSMUSG00000026698 Pigc phosphatidylinositol glycan anchor biosynthesis, class C protein_coding Mus_musculus

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