C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphatidylinositol glycan anchor biosynthesis, class C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000344529 PIGC-001 ENSG00000135845 9606 - 1:172441457-172444060 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000344529
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000344529 5.950±0.00 10.449±0.00 1.682±0.00 4.471±0.45 5.315±1.29 5.560±2.49 1.894±1.32 8.345±0.00 3.951±0.15 3.051±0.86 2.410±0.64 11.495±5.08 15.918±3.40 11.508±2.63

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007X6 CIL_0007X6_0001 VISTA 1:172021746-172625129

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000506 IDA glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex
GO:0003824 TAS catalytic activity
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006501 TAS C-terminal protein lipidation
GO:0006506 TAS:IEA GPI anchor biosynthetic process
GO:0016021 IEA integral component of membrane
GO:0016254 TAS preassembly of GPI anchor in ER membrane
GO:0017176 IEA phosphatidylinositol N-acetylglucosaminyltransferase activity
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028021 Pigc-002 protein_coding Mus_musculus 0 1077
ENSMUST00000111594 Pigc-001 protein_coding Mus_musculus 0 1077
ENSMUST00000160881 Pigc-003 protein_coding Mus_musculus 0 505

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