C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phosphatidylinositol glycan anchor biosynthesis, class C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026698 Pigc 10090 + 1:161969186-162027106 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000028021 Pigc-002 161969188-161972330 protein_coding
  ENSMUST00000111594 Pigc-001 161969186-161973435 protein_coding
  ENSMUST00000159648 Pigc-004 161969302-161970531 protein_coding
  ENSMUST00000160881 Pigc-003 161969299-161970872 protein_coding
  ENSMUST00000161826 Pigc-005 161969200-162027106 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028021ENSMUST00000111594ENSMUST00000160881
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028021 14.317±1.24 13.525±4.41 1.310±0.00 4.998±3.29 18.426±3.85 14.130±4.49 6.065±0.19 9.168±0.46 6.836±1.24 13.174±1.44 3.891±0.38 21.082±10.07 3.380±1.79 19.986±8.68
ENSMUST00000111594 1.594±0.38 N/A 1.242±0.00 0.874±0.03 2.204±0.30 1.691±0.35 0.769±0.15 1.154±0.29 0.860±0.12 2.040±0.34 0.512±0.00 0.704±0.00 0.440±0.15 N/A
ENSMUST00000160881 N/A N/A N/A 3.996±0.00 N/A N/A N/A N/A N/A N/A 3.862±0.65 7.534±2.48 3.983±1.00 19.351±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007X6 CIL_0007X6_0002 VISTA 1:161774031-162377560
CIL_0005CT CIL_0005CT_0002 CGP 1:161969186-162478034

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0006506 IEA GPI anchor biosynthetic process
GO:0016021 IEA integral component of membrane
GO:0017176 IEA phosphatidylinositol N-acetylglucosaminyltransferase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000009113 pigc phosphatidylinositol glycan, class C protein_coding Danio_rerio
ENSG00000135845 PIGC phosphatidylinositol glycan anchor biosynthesis, class C protein_coding Homo_sapiens

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