C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transforming growth factor beta regulator 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000136270 TBRG4 9606 - 7:45100100-45112047 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000258770 TBRG4-003 45100100-45111714 protein_coding
  ENST00000361278 TBRG4-001 45100100-45111718 protein_coding
  ENST00000395655 TBRG4-002 45100100-45112047 protein_coding
  ENST00000461363 TBRG4-011 45104538-45111680 protein_coding
  ENST00000471142 TBRG4-012 45107751-45111697 processed_transcript
  ENST00000475893 TBRG4-009 45108854-45112021 protein_coding
  ENST00000477328 TBRG4-013 45105286-45108943 retained_intron
  ENST00000478116 TBRG4-017 45101774-45102690 retained_intron
  ENST00000478532 TBRG4-007 45104209-45111708 protein_coding
  ENST00000482285 TBRG4-010 45108884-45111501 protein_coding
  ENST00000482482 TBRG4-018 45101600-45102571 retained_intron
  ENST00000483615 TBRG4-016 45101503-45104240 protein_coding
  ENST00000484326 TBRG4-015 45103632-45105478 retained_intron
  ENST00000488222 TBRG4-014 45103031-45105669 retained_intron
  ENST00000494076 TBRG4-004 45100101-45111706 protein_coding
  ENST00000495078 TBRG4-008 45108928-45111697 protein_coding
  ENST00000495973 TBRG4-006 45100101-45107464 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000258770ENST00000361278ENST00000395655ENST00000471142ENST00000477328ENST00000478532ENST00000482285ENST00000482482ENST00000484326ENST00000494076ENST00000495973
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000258770 8.835±0.00 5.309±0.00 0.368±0.00 3.203±1.63 8.952±0.00 5.959±0.00 9.557±0.00 7.613±0.00 3.648±2.52 N/A 13.594±10.06 13.187±7.62 10.337±5.03 7.182±3.96
ENST00000361278 N/A 4.179±0.00 0.455±0.00 5.491±0.00 2.554±0.00 3.685±0.00 3.577±1.32 4.954±0.00 N/A 4.129±0.00 N/A 7.882±2.20 4.703±1.00 13.825±3.09
ENST00000395655 N/A N/A N/A N/A 1.608±0.00 N/A N/A N/A 0.320±0.00 0.320±0.00 N/A N/A N/A N/A
ENST00000471142 N/A N/A N/A N/A N/A N/A N/A N/A 2.335±0.00 N/A N/A N/A N/A N/A
ENST00000477328 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.222±0.00 5.764±0.00 N/A N/A N/A
ENST00000478532 N/A N/A N/A 5.183±0.00 N/A N/A 2.537±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000482285 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.599±0.00 6.480±0.00 N/A N/A N/A
ENST00000482482 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.640±0.00 N/A N/A N/A
ENST00000484326 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.089±0.00 N/A N/A N/A N/A
ENST00000494076 N/A N/A N/A N/A N/A N/A 2.324±0.00 4.418±2.96 6.844±0.00 7.222±0.00 6.201±0.00 5.800±0.00 4.628±1.62 3.887±0.00
ENST00000495973 N/A N/A N/A N/A 0.635±0.00 2.062±0.00 N/A N/A N/A 0.460±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00072M CIL_00072M_0002 CGP 7:45080438-45112047

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004672 IEA protein kinase activity
GO:0005739 IDA mitochondrion
GO:0006468 IEA protein phosphorylation
GO:0007050 TAS cell cycle arrest
GO:0008284 TAS positive regulation of cell proliferation
GO:0044822 IDA poly(A) RNA binding
GO:0045333 ISS cellular respiration

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074807 tbrg4 transforming growth factor beta regulator 4 protein_coding Danio_rerio
ENSMUSG00000000384 Tbrg4 transforming growth factor beta regulated gene 4 protein_coding Mus_musculus

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