C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00072M_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000012347-ENSDARG00000074807 CGP 7955 16:29852634-29906169
GeneTranscriptPositionBiotype
ENSDARG00000012347 (nacad)
NAC alpha domain containing 		ENSDART00000019658 (nacad-001) 29852634-29869234 protein_coding
ENSDARG00000074807 (tbrg4)
transforming growth factor beta regulator 4 		ENSDART00000110731 (tbrg4-201) 29887992-29904289 protein_coding
ENSDART00000145991 (tbrg4-001) 29888245-29906169 protein_coding
CIL_00072M_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000136274-ENSG00000136270 CGP 9606 7:45080438-45112047
GeneTranscriptPositionBiotype
ENSG00000136270 (TBRG4)
transforming growth factor beta regulator 4 		ENST00000258770 (TBRG4-003) 45100100-45111714 protein_coding
ENST00000361278 (TBRG4-001) 45100100-45111718 protein_coding
ENST00000395655 (TBRG4-002) 45100100-45112047 protein_coding
ENST00000461363 (TBRG4-011) 45104538-45111680 protein_coding
ENST00000471142 (TBRG4-012) 45107751-45111697 processed_transcript
ENST00000475893 (TBRG4-009) 45108854-45112021 protein_coding
ENST00000477328 (TBRG4-013) 45105286-45108943 retained_intron
ENST00000478116 (TBRG4-017) 45101774-45102690 retained_intron
ENST00000478532 (TBRG4-007) 45104209-45111708 protein_coding
ENST00000482285 (TBRG4-010) 45108884-45111501 protein_coding
ENST00000482482 (TBRG4-018) 45101600-45102571 retained_intron
ENST00000483615 (TBRG4-016) 45101503-45104240 protein_coding
ENST00000484326 (TBRG4-015) 45103632-45105478 retained_intron
ENST00000488222 (TBRG4-014) 45103031-45105669 retained_intron
ENST00000494076 (TBRG4-004) 45100101-45111706 protein_coding
ENST00000495078 (TBRG4-008) 45108928-45111697 protein_coding
ENST00000495973 (TBRG4-006) 45100101-45107464 retained_intron
ENSG00000136274 (NACAD)
NAC alpha domain containing 		ENST00000460409 (NACAD-002) 45080979-45081400 retained_intron
ENST00000490531 (NACAD-001) 45080438-45088914 protein_coding
ENSG00000201772 (SNORA5C)
small nucleolar RNA, H/ACA box 5C 		ENST00000364902 (SNORA5C-201) 45104906-45105042 snoRNA
ENSG00000206838 (SNORA5A)
small nucleolar RNA, H/ACA box 5A 		ENST00000384111 (SNORA5A-201) 45104349-45104482 snoRNA
CIL_00072M_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000041073-ENSMUSG00000000384 CGP 10090 11:6597823-6626067
GeneTranscriptPositionBiotype
ENSMUSG00000000384 (Tbrg4)
transforming growth factor beta regulated gene 4 		ENSMUST00000000394 (Tbrg4-007) 6616423-6626043 protein_coding
ENSMUST00000131313 (Tbrg4-003) 6620180-6621065 processed_transcript
ENSMUST00000131477 (Tbrg4-004) 6619556-6620915 processed_transcript
ENSMUST00000131815 (Tbrg4-012) 6623200-6626022 processed_transcript
ENSMUST00000132446 (Tbrg4-006) 6619586-6620445 retained_intron
ENSMUST00000134016 (Tbrg4-002) 6617254-6618030 retained_intron
ENSMUST00000136682 (Tbrg4-010) 6620997-6626067 protein_coding
ENSMUST00000144463 (Tbrg4-009) 6623885-6625459 protein_coding
ENSMUST00000150697 (Tbrg4-001) 6616425-6626043 nonsense_mediated_decay
ENSMUST00000151008 (Tbrg4-005) 6620002-6621251 retained_intron
ENSMUST00000156969 (Tbrg4-008) 6615598-6626043 nonsense_mediated_decay
ENSMUST00000189268 (Tbrg4-201) 6615599-6626067 protein_coding
ENSMUSG00000041073 (Nacad)
NAC alpha domain containing 		ENSMUST00000045713 (Nacad-001) 6597823-6606053 protein_coding
ENSMUST00000177050 (Nacad-002) 6597892-6599392 nonsense_mediated_decay
ENSMUST00000177391 (Nacad-003) 6597903-6599938 nonsense_mediated_decay
ENSMUSG00000064495 (Gm24313)
predicted gene, 24313 		ENSMUST00000082561 (Gm24313-201) 6619808-6619940 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00072M_0001ENSDARG00000012347ENSDART00000019658ENSDARG00000074807ENSDART00000110731ENSDART00000145991CIL_00072M_0002ENSG00000136270ENST00000258770ENST00000361278ENST00000395655ENST00000461363ENST00000471142ENST00000475893ENST00000477328ENST00000478116ENST00000478532ENST00000482285ENST00000482482ENST00000483615ENST00000484326ENST00000488222ENST00000494076ENST00000495078ENST00000495973ENSG00000136274ENST00000460409ENST00000490531ENSG00000201772ENST00000364902ENSG00000206838ENST00000384111CIL_00072M_0003ENSMUSG00000000384ENSMUST00000000394ENSMUST00000131313ENSMUST00000131477ENSMUST00000131815ENSMUST00000132446ENSMUST00000134016ENSMUST00000136682ENSMUST00000144463ENSMUST00000150697ENSMUST00000151008ENSMUST00000156969ENSMUST00000189268ENSMUSG00000041073ENSMUST00000045713ENSMUST00000177050ENSMUST00000177391ENSMUSG00000064495ENSMUST00000082561
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00072M_0001ENSDARG00000012347ENSDART00000019658ENSDARG00000074807ENSDART00000110731ENSDART00000145991CIL_00072M_0002ENSG00000136270ENST00000258770ENST00000361278ENST00000395655ENST00000471142ENST00000477328ENST00000478532ENST00000482285ENST00000482482ENST00000484326ENST00000494076ENST00000495973ENSG00000136274ENST00000460409ENST00000490531ENSG00000201772ENST00000364902ENSG00000206838ENST00000384111CIL_00072M_0003ENSMUSG00000000384ENSMUST00000000394ENSMUST00000131477ENSMUST00000156969ENSMUST00000189268ENSMUSG00000041073ENSMUST00000045713ENSMUST00000177050ENSMUST00000177391ENSMUSG00000064495ENSMUST00000082561
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000012347 ENSDART00000019658 N/A N/A N/A 38.384±10.02 N/A N/A 0.251±0.19 0.220±0.05 0.031±0.00 N/A 0.796±0.00 N/A N/A N/A
ENSDARG00000074807 ENSDART00000110731 N/A N/A N/A 2.088±1.53 N/A N/A 1.651±0.73 1.033±0.03 N/A N/A 0.849±0.00 N/A N/A N/A
ENSDART00000145991 N/A N/A N/A 3.993±0.90 N/A N/A 2.334±1.16 2.023±0.71 2.272±0.00 N/A 3.526±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000136270 ENST00000258770 8.835±0.00 5.309±0.00 0.368±0.00 3.203±1.63 8.952±0.00 5.959±0.00 9.557±0.00 7.613±0.00 3.648±2.52 N/A 13.594±10.06 13.187±7.62 10.337±5.03 7.182±3.96
ENST00000361278 N/A 4.179±0.00 0.455±0.00 5.491±0.00 2.554±0.00 3.685±0.00 3.577±1.32 4.954±0.00 N/A 4.129±0.00 N/A 7.882±2.20 4.703±1.00 13.825±3.09
ENST00000395655 N/A N/A N/A N/A 1.608±0.00 N/A N/A N/A 0.320±0.00 0.320±0.00 N/A N/A N/A N/A
ENST00000461363 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471142 N/A N/A N/A N/A N/A N/A N/A N/A 2.335±0.00 N/A N/A N/A N/A N/A
ENST00000475893 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477328 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.222±0.00 5.764±0.00 N/A N/A N/A
ENST00000478116 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478532 N/A N/A N/A 5.183±0.00 N/A N/A 2.537±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000482285 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.599±0.00 6.480±0.00 N/A N/A N/A
ENST00000482482 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.640±0.00 N/A N/A N/A
ENST00000483615 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484326 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.089±0.00 N/A N/A N/A N/A
ENST00000488222 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494076 N/A N/A N/A N/A N/A N/A 2.324±0.00 4.418±2.96 6.844±0.00 7.222±0.00 6.201±0.00 5.800±0.00 4.628±1.62 3.887±0.00
ENST00000495078 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495973 N/A N/A N/A N/A 0.635±0.00 2.062±0.00 N/A N/A N/A 0.460±0.00 N/A N/A N/A N/A
ENSG00000136274 ENST00000460409 N/A N/A N/A N/A N/A N/A N/A N/A 0.116±0.00 N/A N/A N/A N/A N/A
ENST00000490531 1.408±0.00 0.604±0.00 0.255±0.00 16.848±14.31 0.627±0.51 2.196±1.93 0.729±0.68 1.114±0.00 0.252±0.23 1.482±1.40 0.481±0.40 3.352±3.24 1.516±0.31 2.928±0.92
ENSG00000201772 ENST00000364902 0.458±0.00 1.212±0.00 N/A N/A 38.354±0.00 N/A 34.639±34.19 N/A 45.837±45.18 0.474±0.00 N/A N/A N/A 0.684±0.00
ENSG00000206838 ENST00000384111 0.705±0.00 N/A N/A 0.803±0.00 104.918±104.53 N/A 21.580±21.42 99.544±98.44 100.155±99.52 190.112±0.00 64.633±0.00 54.044±64.67 0.952±0.36 0.668±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000000384 ENSMUST00000000394 7.966±2.22 10.465±3.04 4.291±0.00 7.833±4.44 9.526±2.10 21.542±4.62 12.681±3.25 7.250±1.73 12.781±5.97 4.553±1.14 3.524±0.87 10.936±2.19 11.289±6.97 6.494±0.78
ENSMUST00000131313 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131477 N/A 16.786±1.58 N/A N/A 20.035±0.21 31.998±5.11 N/A N/A N/A N/A N/A 26.077±3.70 N/A N/A
ENSMUST00000131815 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132446 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134016 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136682 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144463 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150697 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151008 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156969 4.826±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.702±1.64 5.529±0.00 2.759±0.00 N/A
ENSMUST00000189268 4.700±1.09 6.814±0.00 3.520±0.52 4.309±1.58 5.293±0.52 9.884±1.87 7.845±1.55 5.656±2.10 6.520±3.12 3.206±0.11 4.274±0.92 4.575±0.52 6.664±0.60 10.173±4.43
ENSMUSG00000041073 ENSMUST00000045713 2.068±1.13 0.195±0.10 5.306±0.64 23.417±11.16 0.832±0.00 4.014±1.12 0.410±0.10 0.436±0.11 0.131±0.14 0.529±0.32 0.102±0.01 1.079±0.58 3.941±2.66 0.174±0.09
ENSMUST00000177050 N/A N/A N/A 10.701±0.00 N/A N/A N/A N/A 2.302±1.78 N/A 0.584±0.30 1.988±0.17 18.974±0.00 0.802±0.00
ENSMUST00000177391 N/A N/A N/A 11.449±0.00 N/A N/A N/A N/A 0.517±0.42 N/A 0.247±0.00 N/A 2.811±1.67 0.297±0.00
ENSMUSG00000064495 ENSMUST00000082561 N/A N/A N/A N/A N/A 1197.550±24.73 996.242±0.00 753.812±0.00 21.685±6.04 N/A N/A 1853.323±1844.96 11.081±0.00 N/A

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