C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transforming growth factor beta regulated gene 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000000384 Tbrg4 10090 - 11:6615598-6626067 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000000394 Tbrg4-007 6616423-6626043 protein_coding
  ENSMUST00000131313 Tbrg4-003 6620180-6621065 processed_transcript
  ENSMUST00000131477 Tbrg4-004 6619556-6620915 processed_transcript
  ENSMUST00000131815 Tbrg4-012 6623200-6626022 processed_transcript
  ENSMUST00000132446 Tbrg4-006 6619586-6620445 retained_intron
  ENSMUST00000134016 Tbrg4-002 6617254-6618030 retained_intron
  ENSMUST00000136682 Tbrg4-010 6620997-6626067 protein_coding
  ENSMUST00000144463 Tbrg4-009 6623885-6625459 protein_coding
  ENSMUST00000150697 Tbrg4-001 6616425-6626043 nonsense_mediated_decay
  ENSMUST00000151008 Tbrg4-005 6620002-6621251 retained_intron
  ENSMUST00000156969 Tbrg4-008 6615598-6626043 nonsense_mediated_decay
  ENSMUST00000189268 Tbrg4-201 6615599-6626067 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000000394ENSMUST00000131477ENSMUST00000156969ENSMUST00000189268
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000000394 7.966±2.22 10.465±3.04 4.291±0.00 7.833±4.44 9.526±2.10 21.542±4.62 12.681±3.25 7.250±1.73 12.781±5.97 4.553±1.14 3.524±0.87 10.936±2.19 11.289±6.97 6.494±0.78
ENSMUST00000131477 N/A 16.786±1.58 N/A N/A 20.035±0.21 31.998±5.11 N/A N/A N/A N/A N/A 26.077±3.70 N/A N/A
ENSMUST00000156969 4.826±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.702±1.64 5.529±0.00 2.759±0.00 N/A
ENSMUST00000189268 4.700±1.09 6.814±0.00 3.520±0.52 4.309±1.58 5.293±0.52 9.884±1.87 7.845±1.55 5.656±2.10 6.520±3.12 3.206±0.11 4.274±0.92 4.575±0.52 6.664±0.60 10.173±4.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00072M CIL_00072M_0003 CGP 11:6597823-6626067

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004672 IEA protein kinase activity
GO:0005739 IDA mitochondrion
GO:0006468 IEA protein phosphorylation
GO:0044822 IEA poly(A) RNA binding
GO:0045333 ISS cellular respiration

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074807 tbrg4 transforming growth factor beta regulator 4 protein_coding Danio_rerio
ENSG00000136270 TBRG4 transforming growth factor beta regulator 4 protein_coding Homo_sapiens

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