C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transforming growth factor beta regulator 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000258770 TBRG4-003 ENSG00000136270 9606 - 7:45100100-45111714 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000258770
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000258770 8.835±0.00 5.309±0.00 0.368±0.00 3.203±1.63 8.952±0.00 5.959±0.00 9.557±0.00 7.613±0.00 3.648±2.52 13.594±10.06 13.187±7.62 10.337±5.03 7.182±3.96

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00072M CIL_00072M_0002 CGP 7:45080438-45112047

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004672 IEA protein kinase activity
GO:0005739 IDA mitochondrion
GO:0006468 IEA protein phosphorylation
GO:0007050 TAS cell cycle arrest
GO:0008284 TAS positive regulation of cell proliferation
GO:0044822 IDA poly(A) RNA binding
GO:0045333 ISS cellular respiration

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000189268 Tbrg4-201 protein_coding Mus_musculus 0 1325
ENSMUST00000000394 Tbrg4-007 protein_coding Mus_musculus 0 1325
ENSMUST00000156969 Tbrg4-008 nonsense_mediated_decay Mus_musculus 0 1325
ENSMUST00000150697 Tbrg4-001 nonsense_mediated_decay Mus_musculus 0 658
ENSMUST00000151008 Tbrg4-005 retained_intron Mus_musculus 0 446
ENSMUST00000131477 Tbrg4-004 processed_transcript Mus_musculus 0 353
ENSMUST00000132446 Tbrg4-006 retained_intron Mus_musculus 0 331

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