C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: torsin family 1, member B (torsin B)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000136816 TOR1B 9606 + 9:129803153-129811281 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000259339 TOR1B-001 129803153-129811281 protein_coding
  ENST00000427860 TOR1B-003 129803268-129810518 protein_coding
  ENST00000486372 TOR1B-002 129803157-129804480 processed_transcript
  ENST00000488169 TOR1B-004 129804358-129810316 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000259339ENST00000486372
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000259339 6.289±0.00 6.280±0.00 1.501±0.00 1.294±0.21 4.839±0.07 3.490±0.83 2.201±1.73 3.714±0.11 4.309±2.39 2.594±1.38 2.232±1.48 5.302±2.53 10.746±0.61 8.869±0.62
ENST00000486372 N/A N/A N/A N/A 3.775±0.00 N/A N/A N/A 2.511±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005UB CIL_0005UB_0001 CGP 9:129738331-129811281
CIL_0002LZ CIL_0002LZ_0003 CGP 9:129803153-129824134

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005635 IDA nuclear envelope
GO:0005737 IEA cytoplasm
GO:0005783 IDA:IEA endoplasmic reticulum
GO:0005788 IDA endoplasmic reticulum lumen
GO:0006200 IDA ATP catabolic process
GO:0006986 TAS response to unfolded protein
GO:0007029 IDA endoplasmic reticulum organization
GO:0016020 IEA membrane
GO:0016887 IDA ATPase activity
GO:0051085 IEA chaperone mediated protein folding requiring cofactor
GO:0051260 IDA protein homooligomerization
GO:0070062 IDA extracellular vesicular exosome
GO:0071763 IEA nuclear membrane organization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000026895 tor1l3 torsin family 1 like 3 protein_coding Danio_rerio
ENSDARG00000055856 tor1l1 torsin family 1 like 1 protein_coding Danio_rerio
ENSDARG00000077950 tor1 torsin family 1 protein_coding Danio_rerio
ENSDARG00000090741 AL954146.4 Uncharacterized protein protein_coding Danio_rerio
ENSMUSG00000026848 Tor1b torsin family 1, member B protein_coding Mus_musculus

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