C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 9 open reading frame 78
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000136819 C9orf78 9606 - 9:129827290-129835863 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000372447 C9orf78-007 129827290-129835275 protein_coding
  ENST00000461349 C9orf78-006 129827968-129835254 processed_transcript
  ENST00000461539 C9orf78-004 129829279-129835863 processed_transcript
  ENST00000461762 C9orf78-002 129828428-129834547 processed_transcript
  ENST00000480023 C9orf78-001 129828442-129830685 processed_transcript
  ENST00000492991 C9orf78-005 129830935-129835281 processed_transcript
  ENST00000495934 C9orf78-003 129831410-129833517 processed_transcript
  ENST00000615599 C9orf78-201 129827297-129835281 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000372447ENST00000461539ENST00000492991ENST00000615599
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000372447 N/A N/A N/A 3.426±0.00 N/A 0.455±0.00 1.162±0.00 1.419±0.00 2.596±0.00 N/A N/A 2.988±0.00 9.838±0.00 N/A
ENST00000461539 19.570±0.00 42.375±0.00 2.663±0.00 29.228±22.79 15.757±10.59 32.515±0.00 8.126±6.63 19.827±17.14 5.073±0.00 N/A 1.723±0.00 19.426±8.96 25.025±0.00 46.971±3.63
ENST00000492991 N/A N/A 2.767±0.00 N/A N/A 1.713±0.00 N/A N/A N/A N/A 2.452±0.00 17.345±0.00 18.484±0.00 25.310±0.00
ENST00000615599 15.708±0.00 35.099±0.00 1.356±0.00 21.458±0.00 10.439±7.37 25.312±0.00 12.071±0.00 14.006±12.61 19.897±0.00 13.001±9.91 18.406±0.00 18.246±5.82 16.164±4.98 26.814±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005UA CIL_0005UA_0001 CGP 9:129812944-129835863
CIL_0002M0 CIL_0002M0_0002 CGP 9:129827290-129881838

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002220 C5H9orf78 chromosome 9 open reading frame 78 protein_coding Danio_rerio
ENSMUSG00000026851 BC005624 cDNA sequence BC005624 protein_coding Mus_musculus

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