C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005UA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000136827-ENSG00000136819 CGP 9606 9:129812944-129835863
GeneTranscriptPositionBiotype
ENSG00000136819 (C9orf78)
chromosome 9 open reading frame 78 		ENST00000372447 (C9orf78-007) 129827290-129835275 protein_coding
ENST00000461349 (C9orf78-006) 129827968-129835254 processed_transcript
ENST00000461539 (C9orf78-004) 129829279-129835863 processed_transcript
ENST00000461762 (C9orf78-002) 129828428-129834547 processed_transcript
ENST00000480023 (C9orf78-001) 129828442-129830685 processed_transcript
ENST00000492991 (C9orf78-005) 129830935-129835281 processed_transcript
ENST00000495934 (C9orf78-003) 129831410-129833517 processed_transcript
ENST00000615599 (C9orf78-201) 129827297-129835281 protein_coding
ENSG00000136827 (TOR1A)
torsin family 1, member A (torsin A) 		ENST00000351698 (TOR1A-001) 129812944-129824134 protein_coding
ENST00000473084 (TOR1A-002) 129821376-129824104 processed_transcript
ENST00000473604 (TOR1A-003) 129818323-129823593 processed_transcript
ENST00000474192 (TOR1A-004) 129813608-129818781 processed_transcript
ENSG00000136878 (USP20)
ubiquitin specific peptidase 20 		ENST00000315480 (USP20-003) 129835470-129881828 protein_coding
ENST00000358355 (USP20-002) 129835478-129881828 protein_coding
ENST00000372429 (USP20-001) 129835446-129881838 protein_coding
ENST00000472108 (USP20-007) 129879373-129881828 processed_transcript
ENST00000474895 (USP20-006) 129868322-129878437 processed_transcript
ENST00000491053 (USP20-004) 129834698-129852636 processed_transcript
ENST00000491731 (USP20-008) 129868367-129870152 processed_transcript
ENST00000494971 (USP20-005) 129835417-129858547 processed_transcript
ENST00000496927 (USP20-009) 129875597-129880518 processed_transcript

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0005UA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026849-ENSMUSG00000026851 CGP 10090 2:30960627-30982201
GeneTranscriptPositionBiotype
ENSMUSG00000026849 (Tor1a)
torsin family 1, member A (torsin A) 		ENSMUST00000028200 (Tor1a-001) 30960627-30967933 protein_coding
ENSMUST00000123762 (Tor1a-004) 30961053-30963875 processed_transcript
ENSMUST00000137694 (Tor1a-002) 30960680-30967872 processed_transcript
ENSMUST00000143199 (Tor1a-003) 30966911-30967888 processed_transcript
ENSMUST00000144152 (Tor1a-005) 30961012-30963848 processed_transcript
ENSMUSG00000026851 (BC005624)
cDNA sequence BC005624 		ENSMUST00000028205 (BC005624-001) 30972833-30981941 protein_coding
ENSMUST00000152007 (BC005624-003) 30975892-30980506 processed_transcript
ENSMUST00000156325 (BC005624-002) 30980903-30982201 processed_transcript

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005UA_0001ENSG00000136819ENST00000372447ENST00000461349ENST00000461539ENST00000461762ENST00000480023ENST00000492991ENST00000495934ENST00000615599ENSG00000136827ENST00000351698ENST00000473084ENST00000473604ENST00000474192ENSG00000136878ENST00000315480ENST00000358355ENST00000372429ENST00000472108ENST00000474895ENST00000491053ENST00000491731ENST00000494971ENST00000496927CIL_0005UA_0002ENSMUSG00000026849ENSMUST00000028200ENSMUST00000123762ENSMUST00000137694ENSMUST00000143199ENSMUST00000144152ENSMUSG00000026851ENSMUST00000028205ENSMUST00000152007ENSMUST00000156325
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005UA_0001ENSG00000136819ENST00000372447ENST00000461539ENST00000492991ENST00000615599ENSG00000136827ENST00000351698ENST00000473084ENST00000474192ENSG00000136878ENST00000315480ENST00000358355ENST00000372429ENST00000472108CIL_0005UA_0002ENSMUSG00000026849ENSMUST00000028200ENSMUST00000123762ENSMUST00000137694ENSMUST00000143199ENSMUSG00000026851ENSMUST00000028205ENSMUST00000152007ENSMUST00000156325
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000136819 ENST00000372447 N/A N/A N/A 3.426±0.00 N/A 0.455±0.00 1.162±0.00 1.419±0.00 2.596±0.00 N/A N/A 2.988±0.00 9.838±0.00 N/A
ENST00000461349 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461539 19.570±0.00 42.375±0.00 2.663±0.00 29.228±22.79 15.757±10.59 32.515±0.00 8.126±6.63 19.827±17.14 5.073±0.00 N/A 1.723±0.00 19.426±8.96 25.025±0.00 46.971±3.63
ENST00000461762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492991 N/A N/A 2.767±0.00 N/A N/A 1.713±0.00 N/A N/A N/A N/A 2.452±0.00 17.345±0.00 18.484±0.00 25.310±0.00
ENST00000495934 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000615599 15.708±0.00 35.099±0.00 1.356±0.00 21.458±0.00 10.439±7.37 25.312±0.00 12.071±0.00 14.006±12.61 19.897±0.00 13.001±9.91 18.406±0.00 18.246±5.82 16.164±4.98 26.814±0.12
ENSG00000136827 ENST00000351698 13.142±0.00 15.582±0.00 0.902±0.00 7.474±2.83 7.756±4.04 4.585±2.37 2.976±1.89 6.672±5.37 4.556±1.07 5.795±1.83 2.945±2.57 10.717±4.64 20.082±2.29 8.202±2.49
ENST00000473084 N/A N/A 0.302±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473604 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474192 N/A 5.219±0.00 0.330±0.00 N/A N/A N/A N/A N/A N/A N/A 0.463±0.00 N/A N/A N/A
ENSG00000136878 ENST00000315480 N/A N/A N/A 7.438±0.00 N/A N/A N/A N/A N/A N/A N/A 4.861±0.08 N/A N/A
ENST00000358355 N/A N/A 0.467±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000372429 4.487±0.00 N/A N/A 1.441±0.00 N/A 0.815±0.00 N/A 0.528±0.00 1.482±0.00 8.134±0.00 5.587±0.00 6.191±0.00 4.804±1.29 7.943±0.00
ENST00000472108 N/A 20.567±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474895 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491053 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491731 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494971 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496927 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026849 ENSMUST00000028200 19.585±2.57 21.071±4.48 15.579±3.64 19.536±6.15 17.698±1.92 27.981±3.58 4.121±0.37 18.046±2.87 26.382±3.64 15.348±1.91 2.136±0.33 25.747±5.15 20.241±4.97 3.957±1.58
ENSMUST00000123762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.512±0.00 20.470±3.29 N/A 1.517±0.00
ENSMUST00000137694 2.566±0.37 N/A 2.067±0.27 4.507±0.00 1.795±0.00 N/A 0.817±0.25 1.823±0.00 N/A 1.553±0.00 0.683±0.22 N/A N/A 0.613±0.24
ENSMUST00000143199 N/A 17.466±4.10 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144152 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000026851 ENSMUST00000028205 14.446±1.30 5.953±3.67 40.322±3.24 67.189±40.55 7.837±3.30 6.683±1.42 12.549±0.83 19.857±2.02 20.239±11.22 19.855±2.67 15.765±1.23 22.899±26.94 40.615±17.05 26.519±18.45
ENSMUST00000152007 3.291±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.773±1.63 N/A 14.684±11.24
ENSMUST00000156325 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.367±2.09

Loading