C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: dynactin 3 (p22)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000137100 DCTN3 9606 - 9:34613545-34620523 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000259632 DCTN3-008 34613551-34620480 protein_coding
  ENST00000341694 DCTN3-009 34613551-34620474 protein_coding
  ENST00000378911 DCTN3-007 34617671-34620464 protein_coding
  ENST00000378913 DCTN3-010 34614187-34620481 protein_coding
  ENST00000378916 DCTN3-201 34613545-34620523 protein_coding
  ENST00000421919 DCTN3-003 34613551-34620443 protein_coding
  ENST00000472074 DCTN3-006 34614042-34616452 processed_transcript
  ENST00000472418 DCTN3-001 34613546-34615011 processed_transcript
  ENST00000477738 DCTN3-004 34613604-34620468 protein_coding
  ENST00000479399 DCTN3-002 34613551-34616743 processed_transcript
  ENST00000481438 DCTN3-005 34613732-34614740 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000259632ENST00000378913ENST00000378916ENST00000472074ENST00000477738ENST00000479399
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000259632 33.585±0.00 47.314±0.00 1.286±0.00 47.627±34.36 27.241±24.00 21.597±18.72 21.853±19.21 28.502±24.64 16.923±14.45 23.075±22.42 13.938±8.91 38.791±28.81 41.879±17.27 25.797±19.13
ENST00000378913 N/A N/A N/A N/A 0.671±0.00 N/A N/A N/A N/A 1.075±0.00 N/A N/A N/A N/A
ENST00000378916 N/A N/A 2.951±0.00 13.232±0.00 1.796±0.00 3.091±0.00 0.921±0.00 1.399±0.00 7.264±0.00 0.980±0.00 4.420±0.00 5.076±2.11 5.787±0.00 4.343±0.00
ENST00000472074 N/A N/A 1.457±0.00 N/A N/A 2.185±0.00 N/A 1.720±0.00 N/A N/A N/A N/A N/A N/A
ENST00000477738 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.499±0.00 N/A N/A 5.601±0.00
ENST00000479399 N/A N/A 0.388±0.00 N/A N/A N/A N/A 0.451±0.00 N/A 0.189±0.00 N/A N/A N/A 0.884±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005IL CIL_0005IL_0001 CGP 9:34610486-34620523
CIL_0003GW CIL_0003GW_0001 CGP 9:34613545-34628107

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000086 TAS G2/M transition of mitotic cell cycle
GO:0000278 TAS mitotic cell cycle
GO:0000776 IEA kinetochore
GO:0000910 IDA cytokinesis
GO:0005198 TAS structural molecule activity
GO:0005515 IPI protein binding
GO:0005813 IDA centrosome
GO:0005829 TAS cytosol
GO:0005869 IPI dynactin complex
GO:0005875 IEA microtubule associated complex
GO:0007017 IEA microtubule-based process
GO:0007067 IEA mitotic nuclear division
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0048471 IDA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041363 dctn3 dynactin 3 (p22) protein_coding Danio_rerio
ENSMUSG00000028447 Dctn3 dynactin 3 protein_coding Mus_musculus

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