C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dynactin 3 (p22)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000378916 DCTN3-201 ENSG00000137100 9606 - 9:34613545-34620523 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000378916
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000378916 2.951±0.00 13.232±0.00 1.796±0.00 3.091±0.00 0.921±0.00 1.399±0.00 7.264±0.00 0.980±0.00 4.420±0.00 5.076±2.11 5.787±0.00 4.343±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005IL CIL_0005IL_0001 CGP 9:34610486-34620523
CIL_0003GW CIL_0003GW_0001 CGP 9:34613545-34628107

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000086 TAS G2/M transition of mitotic cell cycle
GO:0000278 TAS mitotic cell cycle
GO:0000776 IEA kinetochore
GO:0000910 IDA cytokinesis
GO:0005198 TAS structural molecule activity
GO:0005515 IPI protein binding
GO:0005813 IDA centrosome
GO:0005829 TAS cytosol
GO:0005869 IPI dynactin complex
GO:0007067 IEA mitotic nuclear division
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0048471 IDA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000171641 Dctn3-201 protein_coding Mus_musculus 0 355
ENSMUST00000147120 Dctn3-002 processed_transcript Mus_musculus 0 355
ENSMUST00000030158 Dctn3-001 protein_coding Mus_musculus 0 355

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