C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dynactin 3 (p22)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000259632 DCTN3-008 ENSG00000137100 9606 - 9:34613551-34620480 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000259632
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000259632 33.585±0.00 47.314±0.00 1.286±0.00 47.627±34.36 27.241±24.00 21.597±18.72 21.853±19.21 28.502±24.64 16.923±14.45 23.075±22.42 13.938±8.91 38.791±28.81 41.879±17.27 25.797±19.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005IL CIL_0005IL_0001 CGP 9:34610486-34620523
CIL_0003GW CIL_0003GW_0001 CGP 9:34613545-34628107

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000086 TAS G2/M transition of mitotic cell cycle
GO:0000278 TAS mitotic cell cycle
GO:0000776 IEA kinetochore
GO:0000910 IDA cytokinesis
GO:0005198 TAS structural molecule activity
GO:0005515 IPI protein binding
GO:0005813 IDA centrosome
GO:0005829 TAS cytosol
GO:0005869 IPI dynactin complex
GO:0005875 IEA microtubule associated complex
GO:0007017 IEA microtubule-based process
GO:0007067 IEA mitotic nuclear division
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0048471 IDA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030158 Dctn3-001 protein_coding Mus_musculus 0 726
ENSMUST00000171641 Dctn3-201 protein_coding Mus_musculus 0 525
ENSMUST00000147120 Dctn3-002 processed_transcript Mus_musculus 0 355

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