C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0005IL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000164967-ENSG00000137100 CGP 9606 9:34610486-34620523
GeneTranscriptPositionBiotype
ENSG00000137100 (DCTN3)
dynactin 3 (p22)
ENST00000259632 (DCTN3-008) 34613551-34620480 protein_coding
ENST00000341694 (DCTN3-009) 34613551-34620474 protein_coding
ENST00000378911 (DCTN3-007) 34617671-34620464 protein_coding
ENST00000378913 (DCTN3-010) 34614187-34620481 protein_coding
ENST00000378916 (DCTN3-201) 34613545-34620523 protein_coding
ENST00000421919 (DCTN3-003) 34613551-34620443 protein_coding
ENST00000472074 (DCTN3-006) 34614042-34616452 processed_transcript
ENST00000472418 (DCTN3-001) 34613546-34615011 processed_transcript
ENST00000477738 (DCTN3-004) 34613604-34620468 protein_coding
ENST00000479399 (DCTN3-002) 34613551-34616743 processed_transcript
ENST00000481438 (DCTN3-005) 34613732-34614740 processed_transcript
ENSG00000164967 (RPP25L)
ribonuclease P/MRP 25kDa subunit-like
ENST00000297613 (RPP25L-002) 34610486-34612104 protein_coding
ENST00000378959 (RPP25L-001) 34610486-34612104 protein_coding
CIL_0005IL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000036114-ENSMUSG00000028447 CGP 10090 4:41712033-41723170
GeneTranscriptPositionBiotype
ENSMUSG00000028447 (Dctn3)
dynactin 3
ENSMUST00000030158 (Dctn3-001) 41714798-41723170 protein_coding
ENSMUST00000147120 (Dctn3-002) 41719768-41723137 processed_transcript
ENSMUST00000171641 (Dctn3-201) 41714798-41723163 protein_coding
ENSMUSG00000036114 (Rpp25l)
ribonuclease P/MRP 25 subunit-like
ENSMUST00000038434 (Rpp25l-001) 41712033-41713534 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005IL_0001ENSG00000137100ENST00000259632ENST00000341694ENST00000378911ENST00000378913ENST00000378916ENST00000421919ENST00000472074ENST00000472418ENST00000477738ENST00000479399ENST00000481438ENSG00000164967ENST00000297613ENST00000378959CIL_0005IL_0002ENSMUSG00000028447ENSMUST00000030158ENSMUST00000147120ENSMUST00000171641ENSMUSG00000036114ENSMUST00000038434
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005IL_0001ENSG00000137100ENST00000259632ENST00000378913ENST00000378916ENST00000472074ENST00000477738ENST00000479399ENSG00000164967ENST00000297613ENST00000378959CIL_0005IL_0002ENSMUSG00000028447ENSMUST00000030158ENSMUST00000147120ENSMUSG00000036114ENSMUST00000038434
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000137100 ENST00000259632 33.585±0.00 47.314±0.00 1.286±0.00 47.627±34.36 27.241±24.00 21.597±18.72 21.853±19.21 28.502±24.64 16.923±14.45 23.075±22.42 13.938±8.91 38.791±28.81 41.879±17.27 25.797±19.13
ENST00000341694 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000378911 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000378913 N/A N/A N/A N/A 0.671±0.00 N/A N/A N/A N/A 1.075±0.00 N/A N/A N/A N/A
ENST00000378916 N/A N/A 2.951±0.00 13.232±0.00 1.796±0.00 3.091±0.00 0.921±0.00 1.399±0.00 7.264±0.00 0.980±0.00 4.420±0.00 5.076±2.11 5.787±0.00 4.343±0.00
ENST00000421919 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472074 N/A N/A 1.457±0.00 N/A N/A 2.185±0.00 N/A 1.720±0.00 N/A N/A N/A N/A N/A N/A
ENST00000472418 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477738 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.499±0.00 N/A N/A 5.601±0.00
ENST00000479399 N/A N/A 0.388±0.00 N/A N/A N/A N/A 0.451±0.00 N/A 0.189±0.00 N/A N/A N/A 0.884±0.00
ENST00000481438 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000164967 ENST00000297613 0.847±0.00 N/A N/A 1.678±1.03 1.446±0.00 2.630±1.39 3.079±0.94 1.416±0.63 N/A 3.048±0.00 6.779±0.19 3.348±2.39 1.984±0.75 3.966±1.93
ENST00000378959 5.208±0.00 8.014±0.00 1.295±0.00 4.651±1.88 4.049±2.13 3.010±2.20 4.943±4.20 7.655±3.75 3.911±2.69 0.579±0.15 16.587±8.13 12.059±5.75 15.153±3.45 8.084±0.97
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028447 ENSMUST00000030158 25.284±12.91 36.349±2.46 38.081±9.57 85.132±49.76 21.805±6.81 34.952±2.95 20.770±4.21 36.860±6.00 26.198±3.57 22.368±2.26 16.204±1.45 29.113±4.25 29.863±10.00 35.658±14.89
ENSMUST00000147120 N/A N/A N/A 57.844±0.00 N/A N/A N/A N/A N/A N/A N/A 44.557±0.00 42.252±18.67 41.545±0.00
ENSMUST00000171641 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000036114 ENSMUST00000038434 16.641±1.31 27.161±3.05 17.074±3.30 17.096±8.47 20.302±7.63 30.058±2.37 12.555±1.54 23.777±1.70 22.413±3.33 18.254±1.24 26.680±2.88 24.950±5.39 11.579±4.12 9.840±3.46

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