C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier organic anion transporter family, member 5A1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000137571 SLCO5A1 9606 - 8:69667047-69835064 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000260126 SLCO5A1-001 69667047-69835064 protein_coding
  ENST00000524703 SLCO5A1-007 69832684-69834225 processed_transcript
  ENST00000524945 SLCO5A1-004 69672343-69833390 protein_coding
  ENST00000526750 SLCO5A1-005 69672553-69834859 nonsense_mediated_decay
  ENST00000528658 SLCO5A1-002 69761365-69834966 processed_transcript
  ENST00000530307 SLCO5A1-006 69672663-69832715 protein_coding
  ENST00000531422 SLCO5A1-008 69832723-69833628 processed_transcript
  ENST00000532388 SLCO5A1-003 69704892-69834009 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000260126ENST00000524945ENST00000526750ENST00000528658ENST00000530307
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000260126 0.030±0.00 N/A 0.027±0.00 0.246±0.00 N/A 1.402±0.00 N/A N/A N/A N/A 0.057±0.00 0.009±0.00 N/A
ENST00000524945 N/A 0.025±0.00 N/A N/A N/A N/A N/A N/A N/A 1.245±0.00 0.066±0.00 N/A N/A
ENST00000526750 N/A N/A N/A 0.152±0.00 N/A N/A 0.084±0.00 N/A 0.268±0.08 N/A 0.121±0.00 N/A N/A
ENST00000528658 N/A 0.025±0.00 N/A N/A 0.098±0.00 0.620±0.00 N/A 0.097±0.00 N/A N/A N/A N/A N/A
ENST00000530307 N/A N/A N/A N/A 0.102±0.00 0.306±0.00 N/A 0.133±0.00 N/A 1.304±0.00 0.121±0.00 0.035±0.00 0.164±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087Y CIL_00087Y_0001 VISTA 8:69097307-69699884
CIL_0001S3 CIL_0001S3_0002 CGP 8:69466624-69835064
CIL_0003BE CIL_0003BE_0001 CGP 8:69667047-70071693

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005515 IEA protein binding
GO:0005886 IEA plasma membrane
GO:0006810 IEA transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000071685 slco5a1 solute carrier organic anion transporter family, member 5A1 protein_coding Danio_rerio
ENSDARG00000086104 SLCO5A1 (2 of 2) solute carrier organic anion transporter family, member 5A1 protein_coding Danio_rerio
ENSMUSG00000025938 Slco5a1 solute carrier organic anion transporter family, member 5A1 protein_coding Mus_musculus

Loading