C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier organic anion transporter family, member 5A1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000530307 SLCO5A1-006 ENSG00000137571 9606 - 8:69672663-69832715 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartLiverMuscleOvaryPlacentaTestisENST00000530307
Transcript ID Colon Heart Liver Muscle Ovary Placenta Testis
ENST00000530307 0.102±0.00 0.306±0.00 0.133±0.00 1.304±0.00 0.121±0.00 0.035±0.00 0.164±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087Y CIL_00087Y_0001 VISTA 8:69097307-69699884
CIL_0001S3 CIL_0001S3_0002 CGP 8:69466624-69835064
CIL_0003BE CIL_0003BE_0001 CGP 8:69667047-70071693

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005515 IEA protein binding
GO:0005886 IEA plasma membrane
GO:0006810 IEA transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000115403 Slco5a1-201 protein_coding Mus_musculus 0 1323
ENSMUST00000188454 Slco5a1-001 protein_coding Mus_musculus 0 1323
ENSMUST00000147606 Slco5a1-005 protein_coding Mus_musculus 0 1195
ENSMUST00000136197 Slco5a1-003 protein_coding Mus_musculus 0 1195
ENSMUST00000115402 Slco5a1-002 protein_coding Mus_musculus 0 1195
ENSMUST00000146763 Slco5a1-004 protein_coding Mus_musculus 0 970
ENSMUST00000191566 Slco5a1-007 processed_transcript Mus_musculus 0 780

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