C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003BE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000137571-ENSG00000147596 CGP 9606 8:69667047-70071693
GeneTranscriptPositionBiotype
ENSG00000137571 (SLCO5A1)
solute carrier organic anion transporter family, member 5A1 		ENST00000260126 (SLCO5A1-001) 69667047-69835064 protein_coding
ENST00000524703 (SLCO5A1-007) 69832684-69834225 processed_transcript
ENST00000524945 (SLCO5A1-004) 69672343-69833390 protein_coding
ENST00000526750 (SLCO5A1-005) 69672553-69834859 nonsense_mediated_decay
ENST00000528658 (SLCO5A1-002) 69761365-69834966 processed_transcript
ENST00000530307 (SLCO5A1-006) 69672663-69832715 protein_coding
ENST00000531422 (SLCO5A1-008) 69832723-69833628 processed_transcript
ENST00000532388 (SLCO5A1-003) 69704892-69834009 retained_intron
ENSG00000147596 (PRDM14)
PR domain containing 14 		ENST00000276594 (PRDM14-001) 70051651-70071327 protein_coding
ENST00000426346 (PRDM14-002) 70069562-70071693 protein_coding
ENSG00000222889 (RN7SKP29)
RNA, 7SK small nuclear pseudogene 29 		ENST00000410957 (RN7SKP29-201) 69700224-69700495 misc_RNA
ENSG00000246528 (RP11-159H10.3)
 ENST00000501104 (RP11-159H10.3-004) 69834111-69837370 antisense
ENST00000528800 (RP11-159H10.3-003) 69834129-69837829 antisense
ENST00000530194 (RP11-159H10.3-001) 69843299-69854971 antisense
ENST00000533300 (RP11-159H10.3-002) 69834153-69850417 antisense
ENSG00000247570 (SDCBPP2)
syndecan binding protein (syntenin) pseudogene 2 		ENST00000424643 (SDCBPP2-001) 69942948-69944648 processed_pseudogene
ENSG00000253721 (SUMO2P20)
SUMO2 pseudogene 20 		ENST00000520803 (SUMO2P20-001) 69987415-69987697 processed_pseudogene
ENSG00000254557 (RP11-102F4.2)
 ENST00000533344 (RP11-102F4.2-001) 69713390-69719722 antisense
ENSG00000255107 (RP11-159H10.1)
 ENST00000531211 (RP11-159H10.1-001) 69859264-69860540 processed_pseudogene
ENSG00000271113 (RP11-159H10.4)
 ENST00000603094 (RP11-159H10.4-001) 69794062-69794734 processed_pseudogene
ENSG00000277740 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000614579 (Metazoa_SRP.1-448) 69851148-69851436 misc_RNA
CIL_0003BE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025938-ENSMUSG00000042414 CGP 10090 1:12866549-13127163
GeneTranscriptPositionBiotype
ENSMUSG00000025938 (Slco5a1)
solute carrier organic anion transporter family, member 5A1 		ENSMUST00000115402 (Slco5a1-002) 12871348-12991177 protein_coding
ENSMUST00000115403 (Slco5a1-201) 12866552-12991135 protein_coding
ENSMUST00000133201 (Slco5a1-006) 12881330-12925043 processed_transcript
ENSMUST00000136197 (Slco5a1-003) 12878595-12991135 protein_coding
ENSMUST00000146763 (Slco5a1-004) 12879683-12990914 protein_coding
ENSMUST00000147606 (Slco5a1-005) 12879683-12990914 protein_coding
ENSMUST00000188454 (Slco5a1-001) 12866549-12992650 protein_coding
ENSMUST00000191566 (Slco5a1-007) 12975819-12991177 processed_transcript
ENSMUSG00000042414 (Prdm14)
PR domain containing 14 		ENSMUST00000047577 (Prdm14-001) 13113457-13127163 protein_coding
ENSMUSG00000069620 (Gm5250)
predicted gene 5250 		ENSMUST00000059065 (Gm5250-001) 13062025-13062345 processed_pseudogene
ENSMUSG00000099498 (RP24-178B14.1)
predicted gene 29283 		ENSMUST00000187394 (RP24-178B14.1-001) 13068838-13078662 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003BE_0001ENSG00000137571ENST00000260126ENST00000524703ENST00000524945ENST00000526750ENST00000528658ENST00000530307ENST00000531422ENST00000532388ENSG00000147596ENST00000276594ENST00000426346ENSG00000222889ENST00000410957ENSG00000246528ENST00000501104ENST00000528800ENST00000530194ENST00000533300ENSG00000247570ENST00000424643ENSG00000253721ENST00000520803ENSG00000254557ENST00000533344ENSG00000255107ENST00000531211ENSG00000271113ENST00000603094ENSG00000277740ENST00000614579CIL_0003BE_0002ENSMUSG00000025938ENSMUST00000115402ENSMUST00000115403ENSMUST00000133201ENSMUST00000136197ENSMUST00000146763ENSMUST00000147606ENSMUST00000188454ENSMUST00000191566ENSMUSG00000042414ENSMUST00000047577ENSMUSG00000069620ENSMUST00000059065ENSMUSG00000099498ENSMUST00000187394
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003BE_0001ENSG00000137571ENST00000260126ENST00000524945ENST00000526750ENST00000528658ENST00000530307ENSG00000147596ENST00000276594ENST00000426346ENSG00000222889ENST00000410957ENSG00000246528ENST00000501104ENST00000533300ENSG00000247570ENST00000424643ENSG00000253721ENST00000520803ENSG00000254557ENST00000533344ENSG00000255107ENST00000531211ENSG00000271113ENST00000603094ENSG00000277740ENST00000614579CIL_0003BE_0002ENSMUSG00000025938ENSMUST00000115402ENSMUST00000115403ENSMUST00000133201ENSMUST00000136197ENSMUST00000146763ENSMUST00000147606ENSMUST00000188454ENSMUSG00000042414ENSMUST00000047577ENSMUSG00000069620ENSMUST00000059065ENSMUSG00000099498ENSMUST00000187394
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000137571 ENST00000260126 0.030±0.00 N/A N/A 0.027±0.00 0.246±0.00 N/A 1.402±0.00 N/A N/A N/A N/A 0.057±0.00 0.009±0.00 N/A
ENST00000524703 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524945 N/A N/A 0.025±0.00 N/A N/A N/A N/A N/A N/A N/A 1.245±0.00 0.066±0.00 N/A N/A
ENST00000526750 N/A N/A N/A N/A 0.152±0.00 N/A N/A 0.084±0.00 N/A 0.268±0.08 N/A 0.121±0.00 N/A N/A
ENST00000528658 N/A N/A 0.025±0.00 N/A N/A 0.098±0.00 0.620±0.00 N/A 0.097±0.00 N/A N/A N/A N/A N/A
ENST00000530307 N/A N/A N/A N/A N/A 0.102±0.00 0.306±0.00 N/A 0.133±0.00 N/A 1.304±0.00 0.121±0.00 0.035±0.00 0.164±0.00
ENST00000531422 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532388 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000147596 ENST00000276594 N/A N/A N/A 0.007±0.00 0.060±0.00 N/A N/A 0.034±0.00 0.007±0.00 0.022±0.01 0.015±0.00 0.041±0.00 N/A 0.436±0.00
ENST00000426346 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.184±0.00 N/A N/A N/A
ENSG00000222889 ENST00000410957 N/A N/A N/A N/A N/A N/A 0.065±0.00 N/A N/A 0.350±0.00 N/A N/A N/A N/A
ENSG00000246528 ENST00000501104 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.195±0.00 N/A N/A N/A N/A
ENST00000528800 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530194 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533300 N/A N/A N/A 0.370±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000247570 ENST00000424643 0.055±0.00 0.042±0.00 N/A 0.072±0.00 0.014±0.00 0.013±0.00 0.064±0.00 N/A N/A 0.013±0.00 N/A 0.062±0.00 N/A 0.199±0.12
ENSG00000253721 ENST00000520803 0.042±0.00 0.044±0.00 N/A N/A 0.042±0.00 0.040±0.00 N/A N/A N/A N/A N/A 0.076±0.00 N/A N/A
ENSG00000254557 ENST00000533344 N/A 0.041±0.00 N/A N/A N/A 0.641±0.00 0.140±0.09 N/A N/A N/A N/A N/A N/A 0.049±0.00
ENSG00000255107 ENST00000531211 N/A N/A N/A 0.088±0.07 N/A 0.025±0.00 N/A N/A N/A N/A N/A 0.015±0.00 N/A 0.021±0.01
ENSG00000271113 ENST00000603094 N/A N/A N/A N/A 0.016±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.031±0.00
ENSG00000277740 ENST00000614579 N/A N/A N/A 0.130±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025938 ENSMUST00000115402 0.152±0.11 N/A N/A N/A 0.417±0.16 0.078±0.01 N/A N/A 0.003±0.00 0.124±0.03 N/A 0.225±0.10 N/A 0.100±0.03
ENSMUST00000115403 0.476±0.06 N/A N/A 4.162±1.86 0.654±0.30 0.084±0.04 N/A 0.091±0.07 0.000±0.00 0.119±0.00 1.114±0.00 0.204±0.06 0.166±0.05 N/A
ENSMUST00000133201 N/A N/A N/A N/A N/A 0.076±0.00 N/A 0.055±0.00 N/A N/A N/A N/A N/A 1.748±0.31
ENSMUST00000136197 0.105±0.09 0.041±0.00 N/A N/A 0.305±0.11 0.040±0.01 N/A N/A 0.005±0.00 0.110±0.00 N/A 0.145±0.00 N/A N/A
ENSMUST00000146763 N/A 0.048±0.00 N/A N/A N/A 0.067±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147606 N/A N/A N/A N/A N/A N/A N/A N/A 0.004±0.00 N/A N/A 0.203±0.00 N/A N/A
ENSMUST00000188454 0.098±0.07 0.081±0.04 0.031±0.02 1.684±1.76 0.622±0.29 0.060±0.03 1.532±0.33 0.039±0.04 0.008±0.01 0.593±0.10 1.855±0.45 0.282±0.09 0.434±0.24 0.148±0.13
ENSMUST00000191566 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000042414 ENSMUST00000047577 0.016±0.00 N/A N/A 0.014±0.01 0.036±0.00 0.288±0.07 N/A 0.020±0.01 0.041±0.01 N/A N/A 0.051±0.00 0.208±0.18 0.022±0.01
ENSMUSG00000069620 ENSMUST00000059065 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.031±0.00 N/A
ENSMUSG00000099498 ENSMUST00000187394 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.261±0.00 0.342±0.00 N/A 0.898±0.60

Loading