C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier organic anion transporter family, member 5A1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025938 Slco5a1 10090 - 1:12866549-12992650 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000115402 Slco5a1-002 12871348-12991177 protein_coding
  ENSMUST00000115403 Slco5a1-201 12866552-12991135 protein_coding
  ENSMUST00000133201 Slco5a1-006 12881330-12925043 processed_transcript
  ENSMUST00000136197 Slco5a1-003 12878595-12991135 protein_coding
  ENSMUST00000146763 Slco5a1-004 12879683-12990914 protein_coding
  ENSMUST00000147606 Slco5a1-005 12879683-12990914 protein_coding
  ENSMUST00000188454 Slco5a1-001 12866549-12992650 protein_coding
  ENSMUST00000191566 Slco5a1-007 12975819-12991177 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000115402ENSMUST00000115403ENSMUST00000133201ENSMUST00000136197ENSMUST00000146763ENSMUST00000147606ENSMUST00000188454
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000115402 0.152±0.11 N/A N/A N/A 0.417±0.16 0.078±0.01 N/A N/A 0.003±0.00 0.124±0.03 N/A 0.225±0.10 N/A 0.100±0.03
ENSMUST00000115403 0.476±0.06 N/A N/A 4.162±1.86 0.654±0.30 0.084±0.04 N/A 0.091±0.07 0.000±0.00 0.119±0.00 1.114±0.00 0.204±0.06 0.166±0.05 N/A
ENSMUST00000133201 N/A N/A N/A N/A N/A 0.076±0.00 N/A 0.055±0.00 N/A N/A N/A N/A N/A 1.748±0.31
ENSMUST00000136197 0.105±0.09 0.041±0.00 N/A N/A 0.305±0.11 0.040±0.01 N/A N/A 0.005±0.00 0.110±0.00 N/A 0.145±0.00 N/A N/A
ENSMUST00000146763 N/A 0.048±0.00 N/A N/A N/A 0.067±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147606 N/A N/A N/A N/A N/A N/A N/A N/A 0.004±0.00 N/A N/A 0.203±0.00 N/A N/A
ENSMUST00000188454 0.098±0.07 0.081±0.04 0.031±0.02 1.684±1.76 0.622±0.29 0.060±0.03 1.532±0.33 0.039±0.04 0.008±0.01 0.593±0.10 1.855±0.45 0.282±0.09 0.434±0.24 0.148±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087Y CIL_00087Y_0002 VISTA 1:12314812-12917322
CIL_0001S3 CIL_0001S3_0003 CGP 1:12692277-12992650
CIL_0003BE CIL_0003BE_0002 CGP 1:12866549-13127163

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005215 IEA transporter activity
GO:0005575 ND cellular_component
GO:0006810 IEA transport
GO:0008150 ND biological_process
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000071685 slco5a1 solute carrier organic anion transporter family, member 5A1 protein_coding Danio_rerio
ENSDARG00000086104 SLCO5A1 (2 of 2) solute carrier organic anion transporter family, member 5A1 protein_coding Danio_rerio
ENSG00000137571 SLCO5A1 solute carrier organic anion transporter family, member 5A1 protein_coding Homo_sapiens

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