C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane protein 62
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000137842 TMEM62 9606 + 15:43123279-43185146 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000260403 TMEM62-001 43133524-43185146 protein_coding
  ENST00000563859 TMEM62-003 43160394-43185089 retained_intron
  ENST00000564494 TMEM62-002 43134282-43184989 protein_coding
  ENST00000564698 TMEM62-012 43123279-43149064 protein_coding
  ENST00000565291 TMEM62-004 43133162-43146521 protein_coding
  ENST00000566122 TMEM62-015 43180661-43184468 retained_intron
  ENST00000566308 TMEM62-016 43160323-43169853 retained_intron
  ENST00000567441 TMEM62-007 43133843-43151890 nonsense_mediated_decay
  ENST00000568182 TMEM62-008 43133842-43151834 nonsense_mediated_decay
  ENST00000568197 TMEM62-009 43133926-43146607 nonsense_mediated_decay
  ENST00000569369 TMEM62-014 43169015-43184385 processed_transcript
  ENST00000569535 TMEM62-005 43133144-43148788 nonsense_mediated_decay
  ENST00000569897 TMEM62-013 43146123-43149136 retained_intron
  ENST00000569926 TMEM62-006 43133719-43146590 nonsense_mediated_decay
  ENST00000570109 TMEM62-010 43133842-43135782 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000260403ENST00000564494
Transcript ID Adrenal Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000260403 3.755±0.00 3.530±0.00 3.921±1.05 2.901±0.00 3.560±1.42 2.350±0.00 3.656±0.00 N/A 5.256±3.51 8.740±2.06 3.669±0.00
ENST00000564494 N/A 3.774±0.00 N/A N/A 2.019±0.00 N/A N/A 3.804±0.00 4.388±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005YC CIL_0005YC_0001 CGP 15:43123279-43197176

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000053890 tmem62 transmembrane protein 62 protein_coding Danio_rerio
ENSMUSG00000054484 Tmem62 transmembrane protein 62 protein_coding Mus_musculus

Loading