C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane protein 62
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000054484 Tmem62 10090 + 2:120977017-121007852 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000067582 Tmem62-001 120977017-121007852 protein_coding
  ENSMUST00000110686 Tmem62-003 120977533-121007644 protein_coding
  ENSMUST00000123656 Tmem62-005 120977670-120980605 retained_intron
  ENSMUST00000130010 Tmem62-006 120981088-120990356 processed_transcript
  ENSMUST00000135599 Tmem62-004 120996274-121007043 retained_intron
  ENSMUST00000139428 Tmem62-002 120977017-121007852 nonsense_mediated_decay
  ENSMUST00000147347 Tmem62-007 120984370-120986959 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000067582ENSMUST00000110686ENSMUST00000123656ENSMUST00000130010ENSMUST00000135599ENSMUST00000139428
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000067582 2.000±0.76 5.764±2.95 1.655±0.00 2.180±0.56 2.284±1.08 2.493±0.75 0.687±0.19 3.088±1.26 1.802±1.06 3.734±1.80 0.751±0.11 1.722±0.70 2.030±1.16 0.567±0.37
ENSMUST00000110686 1.142±0.14 3.401±0.00 0.638±0.12 2.184±0.43 1.157±0.00 1.407±0.00 0.602±0.04 1.007±0.12 0.816±0.60 1.440±0.22 0.474±0.21 1.815±0.53 1.518±1.23 0.354±0.16
ENSMUST00000123656 N/A N/A N/A 9.013±0.00 N/A N/A N/A N/A N/A N/A N/A 5.946±0.00 10.044±5.73 2.463±0.00
ENSMUST00000130010 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.736±0.00
ENSMUST00000135599 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.829±0.00
ENSMUST00000139428 N/A 8.159±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005YC CIL_0005YC_0002 CGP 2:120977017-121016904

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000053890 tmem62 transmembrane protein 62 protein_coding Danio_rerio
ENSG00000137842 TMEM62 transmembrane protein 62 protein_coding Homo_sapiens

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