C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005YC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000137842-ENSG00000166946 CGP 9606 15:43123279-43197176
GeneTranscriptPositionBiotype
ENSG00000137842 (TMEM62)
transmembrane protein 62 		ENST00000260403 (TMEM62-001) 43133524-43185146 protein_coding
ENST00000563859 (TMEM62-003) 43160394-43185089 retained_intron
ENST00000564494 (TMEM62-002) 43134282-43184989 protein_coding
ENST00000564698 (TMEM62-012) 43123279-43149064 protein_coding
ENST00000565291 (TMEM62-004) 43133162-43146521 protein_coding
ENST00000566122 (TMEM62-015) 43180661-43184468 retained_intron
ENST00000566308 (TMEM62-016) 43160323-43169853 retained_intron
ENST00000567441 (TMEM62-007) 43133843-43151890 nonsense_mediated_decay
ENST00000568182 (TMEM62-008) 43133842-43151834 nonsense_mediated_decay
ENST00000568197 (TMEM62-009) 43133926-43146607 nonsense_mediated_decay
ENST00000569369 (TMEM62-014) 43169015-43184385 processed_transcript
ENST00000569535 (TMEM62-005) 43133144-43148788 nonsense_mediated_decay
ENST00000569897 (TMEM62-013) 43146123-43149136 retained_intron
ENST00000569926 (TMEM62-006) 43133719-43146590 nonsense_mediated_decay
ENST00000570109 (TMEM62-010) 43133842-43135782 retained_intron
ENSG00000166946 (CCNDBP1)
cyclin D-type binding-protein 1 		ENST00000300213 (CCNDBP1-001) 43185257-43197176 protein_coding
ENST00000444658 (CCNDBP1-017) 43185940-43195192 retained_intron
ENST00000562553 (CCNDBP1-014) 43185446-43191675 nonsense_mediated_decay
ENST00000563065 (CCNDBP1-003) 43185406-43195195 nonsense_mediated_decay
ENST00000564630 (CCNDBP1-005) 43185118-43193306 retained_intron
ENST00000565296 (CCNDBP1-010) 43185439-43195195 nonsense_mediated_decay
ENST00000565958 (CCNDBP1-016) 43194184-43195198 retained_intron
ENST00000566515 (CCNDBP1-009) 43185328-43195164 nonsense_mediated_decay
ENST00000566833 (CCNDBP1-012) 43185439-43189466 retained_intron
ENST00000566882 (CCNDBP1-007) 43188452-43193356 retained_intron
ENST00000567434 (CCNDBP1-013) 43185409-43191675 nonsense_mediated_decay
ENST00000567690 (CCNDBP1-015) 43185920-43194461 retained_intron
ENST00000568507 (CCNDBP1-006) 43185439-43195180 nonsense_mediated_decay
ENST00000568936 (CCNDBP1-008) 43189262-43193335 retained_intron
ENST00000569745 (CCNDBP1-002) 43185405-43195160 nonsense_mediated_decay
CIL_0005YC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000054484-ENSMUSG00000023572 CGP 10090 2:120977017-121016904
GeneTranscriptPositionBiotype
ENSMUSG00000023572 (Ccndbp1)
cyclin D-type binding-protein 1 		ENSMUST00000060455 (Ccndbp1-001) 121008403-121016904 protein_coding
ENSMUST00000099488 (Ccndbp1-003) 121008432-121015120 protein_coding
ENSMUST00000099489 (Ccndbp1-002) 121008448-121016904 protein_coding
ENSMUST00000129717 (Ccndbp1-007) 121012491-121012960 processed_transcript
ENSMUST00000135036 (Ccndbp1-006) 121011055-121011756 retained_intron
ENSMUST00000140468 (Ccndbp1-005) 121008467-121012948 processed_transcript
ENSMUST00000151532 (Ccndbp1-004) 121008704-121010577 retained_intron
ENSMUST00000171260 (Ccndbp1-201) 121008472-121016513 protein_coding
ENSMUSG00000054484 (Tmem62)
transmembrane protein 62 		ENSMUST00000067582 (Tmem62-001) 120977017-121007852 protein_coding
ENSMUST00000110686 (Tmem62-003) 120977533-121007644 protein_coding
ENSMUST00000123656 (Tmem62-005) 120977670-120980605 retained_intron
ENSMUST00000130010 (Tmem62-006) 120981088-120990356 processed_transcript
ENSMUST00000135599 (Tmem62-004) 120996274-121007043 retained_intron
ENSMUST00000139428 (Tmem62-002) 120977017-121007852 nonsense_mediated_decay
ENSMUST00000147347 (Tmem62-007) 120984370-120986959 processed_transcript
ENSMUSG00000065883 (Gm22865)
predicted gene, 22865 		ENSMUST00000083949 (Gm22865-201) 121004089-121004302 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005YC_0001ENSG00000137842ENST00000260403ENST00000564494ENSG00000166946ENST00000300213ENST00000444658ENST00000563065ENST00000564630ENST00000565958ENST00000566515ENST00000567434ENST00000567690ENST00000568507ENST00000569745CIL_0005YC_0002ENSMUSG00000023572ENSMUST00000060455ENSMUST00000099488ENSMUST00000099489ENSMUST00000129717ENSMUST00000140468ENSMUST00000171260ENSMUSG00000054484ENSMUST00000067582ENSMUST00000110686ENSMUST00000123656ENSMUST00000130010ENSMUST00000135599ENSMUST00000139428ENSMUSG00000065883ENSMUST00000083949
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000137842 ENST00000260403 N/A 3.755±0.00 N/A 3.530±0.00 3.921±1.05 N/A 2.901±0.00 3.560±1.42 2.350±0.00 3.656±0.00 N/A 5.256±3.51 8.740±2.06 3.669±0.00
ENST00000563859 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564494 N/A N/A N/A 3.774±0.00 N/A N/A N/A 2.019±0.00 N/A N/A 3.804±0.00 4.388±0.00 N/A N/A
ENST00000564698 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565291 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566122 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566308 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567441 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568182 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568197 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569369 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569535 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569897 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569926 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570109 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000166946 ENST00000300213 3.933±0.00 2.688±0.00 N/A 1.913±0.00 2.988±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000444658 N/A N/A 1.866±0.00 6.978±0.78 5.058±0.00 N/A N/A N/A 11.441±0.00 10.050±0.00 1.975±0.00 6.451±0.05 14.794±4.28 N/A
ENST00000562553 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563065 N/A 9.012±0.00 N/A 6.853±0.00 12.615±0.00 14.459±0.00 6.146±1.66 7.466±3.80 4.014±0.00 7.570±0.00 7.626±2.46 7.161±0.63 25.322±3.67 13.528±0.00
ENST00000564630 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.538±0.00 N/A N/A N/A
ENST00000565296 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565958 N/A N/A 7.090±0.00 17.411±0.00 12.610±0.00 14.703±0.00 N/A N/A N/A N/A 9.155±0.00 N/A N/A N/A
ENST00000566515 N/A N/A 1.754±0.00 4.239±0.00 N/A 4.588±0.00 3.274±0.00 9.336±0.00 2.895±0.00 7.872±0.00 N/A 4.281±0.00 21.252±3.43 N/A
ENST00000566833 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566882 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567434 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.532±0.00 39.229±0.00 17.971±0.00
ENST00000567690 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.394±0.00
ENST00000568507 12.532±0.00 9.898±0.00 N/A 8.685±0.00 8.967±0.00 13.776±0.00 7.387±0.00 N/A 3.693±0.00 10.988±0.00 5.284±0.00 5.879±0.00 19.647±4.06 8.383±1.15
ENST00000568936 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569745 16.049±0.00 8.798±0.00 N/A N/A N/A N/A 4.350±0.00 7.228±0.00 N/A 8.648±0.00 N/A 7.556±1.64 19.641±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000023572 ENSMUST00000060455 10.034±2.05 6.776±1.70 27.746±3.87 16.826±6.27 11.726±5.02 7.303±1.96 14.271±1.67 20.289±2.13 17.974±13.09 12.535±1.43 9.477±0.76 6.396±7.39 9.797±3.52 5.672±0.83
ENSMUST00000099488 N/A 4.244±1.61 N/A 4.177±0.00 N/A 2.558±0.44 N/A N/A 1.812±0.28 N/A 1.554±0.00 3.269±1.80 3.061±1.15 N/A
ENSMUST00000099489 2.985±0.91 2.301±0.41 N/A N/A 3.924±0.74 2.643±0.53 N/A N/A 2.261±2.02 4.149±0.42 N/A 3.117±1.29 1.841±0.34 1.205±0.08
ENSMUST00000129717 N/A N/A N/A 37.813±0.00 N/A N/A N/A N/A N/A N/A N/A 33.864±0.00 N/A N/A
ENSMUST00000135036 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140468 N/A 5.378±0.00 N/A 26.093±0.00 N/A N/A N/A N/A N/A N/A N/A 6.427±7.37 11.455±5.87 11.065±0.00
ENSMUST00000151532 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171260 2.838±0.05 3.870±0.00 N/A 10.050±0.00 2.451±0.00 3.115±1.41 N/A N/A 1.517±0.00 2.535±0.00 N/A 2.124±0.63 3.619±0.00 N/A
ENSMUSG00000054484 ENSMUST00000067582 2.000±0.76 5.764±2.95 1.655±0.00 2.180±0.56 2.284±1.08 2.493±0.75 0.687±0.19 3.088±1.26 1.802±1.06 3.734±1.80 0.751±0.11 1.722±0.70 2.030±1.16 0.567±0.37
ENSMUST00000110686 1.142±0.14 3.401±0.00 0.638±0.12 2.184±0.43 1.157±0.00 1.407±0.00 0.602±0.04 1.007±0.12 0.816±0.60 1.440±0.22 0.474±0.21 1.815±0.53 1.518±1.23 0.354±0.16
ENSMUST00000123656 N/A N/A N/A 9.013±0.00 N/A N/A N/A N/A N/A N/A N/A 5.946±0.00 10.044±5.73 2.463±0.00
ENSMUST00000130010 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.736±0.00
ENSMUST00000135599 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.829±0.00
ENSMUST00000139428 N/A 8.159±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147347 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000065883 ENSMUST00000083949 5.715±0.00 N/A 0.891±0.50 2.087±1.40 5.963±0.00 N/A N/A 3.415±0.00 0.231±0.00 1.574±0.00 N/A 2.726±0.80 0.780±0.46 1.238±0.00

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