C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 62
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000260403 TMEM62-001 ENSG00000137842 9606 + 15:43133524-43185146 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENST00000260403
Transcript ID Adrenal Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000260403 3.755±0.00 3.530±0.00 3.921±1.05 2.901±0.00 3.560±1.42 2.350±0.00 3.656±0.00 5.256±3.51 8.740±2.06 3.669±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005YC CIL_0005YC_0001 CGP 15:43123279-43197176

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000067582 Tmem62-001 protein_coding Mus_musculus 0 2117
ENSMUST00000110686 Tmem62-003 protein_coding Mus_musculus 0 1991
ENSMUST00000139428 Tmem62-002 nonsense_mediated_decay Mus_musculus 0 896
ENSMUST00000130010 Tmem62-006 processed_transcript Mus_musculus 0 412
ENSMUST00000123656 Tmem62-005 retained_intron Mus_musculus 0 399
ENSMUST00000147347 Tmem62-007 processed_transcript Mus_musculus 0 231

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