C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: prolactin regulatory element binding
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000138073 PREB 9606 - 2:27130756-27134675 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000260643 PREB-001 27130756-27134675 protein_coding
  ENST00000406567 PREB-003 27130775-27134612 protein_coding
  ENST00000416802 PREB-011 27133124-27134636 processed_transcript
  ENST00000430533 PREB-010 27131159-27132620 protein_coding
  ENST00000441451 PREB-008 27131440-27132252 nonsense_mediated_decay
  ENST00000444452 PREB-002 27130765-27134615 nonsense_mediated_decay
  ENST00000456259 PREB-009 27130791-27132385 protein_coding
  ENST00000468045 PREB-005 27130756-27134629 retained_intron
  ENST00000474802 PREB-007 27132511-27134666 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000260643ENST00000406567ENST00000416802ENST00000430533ENST00000444452ENST00000468045ENST00000474802
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000260643 16.383±0.00 22.254±0.00 1.029±0.00 5.845±0.00 24.566±14.43 6.291±0.00 5.221±3.74 19.919±0.00 19.139±0.00 7.912±4.22 17.644±0.00 25.260±23.74 18.688±4.37 20.903±0.00
ENST00000406567 N/A N/A N/A N/A N/A 5.261±0.00 2.535±0.00 N/A 4.937±0.00 N/A 5.199±0.00 12.576±8.77 15.661±0.00 47.177±0.00
ENST00000416802 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.492±0.00 N/A
ENST00000430533 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 72.840±0.00 38.056±0.00 N/A
ENST00000444452 N/A N/A 3.699±0.00 1.869±0.00 N/A 6.898±0.00 3.122±0.81 14.695±0.00 6.181±4.92 11.416±0.00 16.050±0.00 17.445±0.00 5.721±1.27 12.040±0.00
ENST00000468045 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.584±0.00 N/A N/A
ENST00000474802 N/A N/A 0.773±0.00 N/A N/A 1.785±0.00 N/A 3.191±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006888 TAS ER to Golgi vesicle-mediated transport
GO:0006987 TAS activation of signaling protein activity involved in unfolded protein response
GO:0015031 IEA protein transport
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0018279 TAS protein N-linked glycosylation via asparagine
GO:0030968 TAS endoplasmic reticulum unfolded protein response
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0048208 TAS COPII vesicle coating
GO:0061024 TAS membrane organization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054897 preb prolactin regulatory element binding protein_coding Danio_rerio
ENSMUSG00000045302 Preb prolactin regulatory element binding protein_coding Mus_musculus

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