C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATP-binding cassette, sub-family G (WHITE), member 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000138075 ABCG5 9606 - 2:43812472-43838865 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000260645 ABCG5-001 43812472-43838819 protein_coding
  ENST00000405322 ABCG5-002 43812560-43838752 protein_coding
  ENST00000409962 ABCG5-004 43812843-43838865 nonsense_mediated_decay
  ENST00000486512 ABCG5-003 43812560-43838750 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000260645ENST00000405322ENST00000409962ENST00000486512
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000260645 N/A N/A N/A 0.067±0.05 N/A N/A N/A 4.304±0.00 N/A N/A 0.019±0.00 N/A 0.037±0.00
ENST00000405322 N/A N/A N/A N/A N/A N/A 0.011±0.00 N/A N/A N/A N/A N/A N/A
ENST00000409962 N/A 0.011±0.00 N/A 0.037±0.00 0.026±0.00 0.029±0.01 N/A N/A N/A N/A N/A N/A 0.031±0.00
ENST00000486512 0.016±0.00 0.019±0.00 0.044±0.00 N/A 0.098±0.00 N/A 0.039±0.00 1.569±0.00 0.022±0.00 0.028±0.00 0.011±0.00 0.015±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001XP CIL_0001XP_0001 CGP 2:43774039-43838865
CIL_0001XO CIL_0001XO_0001 CGP 2:43812472-43878466

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005524 IDA:IEA ATP binding
GO:0005886 TAS plasma membrane
GO:0006200 IEA ATP catabolic process
GO:0007584 IEA response to nutrient
GO:0007588 IGI excretion
GO:0010212 IEA response to ionizing radiation
GO:0010949 IMP negative regulation of intestinal phytosterol absorption
GO:0015918 TAS sterol transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016324 IMP apical plasma membrane
GO:0016887 IDA:IEA ATPase activity
GO:0017127 IGI cholesterol transporter activity
GO:0030299 IC intestinal cholesterol absorption
GO:0033344 IGI cholesterol efflux
GO:0042493 IEA response to drug
GO:0042632 IMP cholesterol homeostasis
GO:0044281 TAS small molecule metabolic process
GO:0045177 IEA apical part of cell
GO:0045796 IMP negative regulation of intestinal cholesterol absorption
GO:0046982 IPI protein heterodimerization activity
GO:0055085 TAS transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063078 abcg5 ATP-binding cassette, sub-family G (WHITE), member 5 protein_coding Danio_rerio
ENSMUSG00000040505 Abcg5 ATP-binding cassette, sub-family G (WHITE), member 5 protein_coding Mus_musculus

Loading